Protein–RNA interactions for Protein: E9Q9U0

Usp17lb, Ubiquitin carboxyl-terminal hydrolase 17-like protein B, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp17lbE9Q9U0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp17lbE9Q9U0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Usp17lbE9Q9U0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp17lbE9Q9U0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.96■□□□□ 0.95
Usp17lbE9Q9U0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 Mir1668-201ENSMUST00000184114 107 ntBASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp17lbE9Q9U0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Gm7284-201ENSMUST00000131667 944 ntBASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Gm27389-201ENSMUST00000183622 195 ntBASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Gm5587-201ENSMUST00000206270 674 ntBASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Il3ra-202ENSMUST00000223589 738 ntBASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp17lbE9Q9U0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Gm9731-201ENSMUST00000209480 747 ntBASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp17lbE9Q9U0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp17lbE9Q9U0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp17lbE9Q9U0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp17lbE9Q9U0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.91■□□□□ 0.94
Usp17lbE9Q9U0 Gm37025-201ENSMUST00000195159 829 ntBASIC20.91■□□□□ 0.94
Usp17lbE9Q9U0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp17lbE9Q9U0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Usp17lbE9Q9U0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp17lbE9Q9U0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp17lbE9Q9U0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp17lbE9Q9U0 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.9■□□□□ 0.94
Usp17lbE9Q9U0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp17lbE9Q9U0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp17lbE9Q9U0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp17lbE9Q9U0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp17lbE9Q9U0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp17lbE9Q9U0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp17lbE9Q9U0 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.9■□□□□ 0.94
Usp17lbE9Q9U0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Usp17lbE9Q9U0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp17lbE9Q9U0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp17lbE9Q9U0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.89■□□□□ 0.93
Usp17lbE9Q9U0 Gm9013-201ENSMUST00000132939 882 ntBASIC20.89■□□□□ 0.93
Usp17lbE9Q9U0 Gm27704-201ENSMUST00000185094 107 ntBASIC20.89■□□□□ 0.93
Usp17lbE9Q9U0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp17lbE9Q9U0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp17lbE9Q9U0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp17lbE9Q9U0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp17lbE9Q9U0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp17lbE9Q9U0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Usp17lbE9Q9U0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp17lbE9Q9U0 Notumos-201ENSMUST00000151998 2659 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms