Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
Ift140E9PY46 AC159301.1-201ENSMUST00000225130 1182 ntBASIC28.24■■■□□ 2.11
Ift140E9PY46 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC28.24■■■□□ 2.11
Ift140E9PY46 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ift140E9PY46 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ift140E9PY46 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ift140E9PY46 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Ift140E9PY46 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC28.23■■■□□ 2.11
Ift140E9PY46 Gm18195-201ENSMUST00000207604 706 ntBASIC28.23■■■□□ 2.11
Ift140E9PY46 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ift140E9PY46 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ift140E9PY46 Gm20634-201ENSMUST00000090779 2956 ntBASIC28.23■■■□□ 2.11
Ift140E9PY46 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ift140E9PY46 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ift140E9PY46 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Ift140E9PY46 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ift140E9PY46 Gm9449-201ENSMUST00000207265 1011 ntBASIC28.22■■■□□ 2.11
Ift140E9PY46 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ift140E9PY46 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ift140E9PY46 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ift140E9PY46 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC28.21■■■□□ 2.11
Ift140E9PY46 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ift140E9PY46 Gm34220-201ENSMUST00000223001 2709 ntBASIC28.21■■■□□ 2.11
Ift140E9PY46 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ift140E9PY46 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC28.21■■■□□ 2.11
Ift140E9PY46 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC28.21■■■□□ 2.11
Ift140E9PY46 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ift140E9PY46 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ift140E9PY46 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ift140E9PY46 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ift140E9PY46 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC28.21■■■□□ 2.11
Ift140E9PY46 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ift140E9PY46 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ift140E9PY46 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
Ift140E9PY46 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Ift140E9PY46 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Ift140E9PY46 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
Ift140E9PY46 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Ift140E9PY46 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
Ift140E9PY46 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
Ift140E9PY46 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Ift140E9PY46 Gm38160-201ENSMUST00000193090 2499 ntBASIC28.2■■■□□ 2.1
Ift140E9PY46 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Ift140E9PY46 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC28.19■■■□□ 2.1
Ift140E9PY46 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC28.19■■■□□ 2.1
Ift140E9PY46 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ift140E9PY46 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Ift140E9PY46 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Ift140E9PY46 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Ift140E9PY46 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Ift140E9PY46 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC28.19■■■□□ 2.1
Ift140E9PY46 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC28.19■■■□□ 2.1
Ift140E9PY46 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC28.19■■■□□ 2.1
Ift140E9PY46 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ift140E9PY46 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Ift140E9PY46 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ift140E9PY46 AC122351.1-201ENSMUST00000220467 126 ntBASIC28.18■■■□□ 2.1
Ift140E9PY46 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ift140E9PY46 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ift140E9PY46 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ift140E9PY46 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ift140E9PY46 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ift140E9PY46 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ift140E9PY46 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ift140E9PY46 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ift140E9PY46 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ift140E9PY46 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ift140E9PY46 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ift140E9PY46 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ift140E9PY46 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC28.16■■■□□ 2.1
Ift140E9PY46 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ift140E9PY46 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC28.16■■■□□ 2.1
Ift140E9PY46 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ift140E9PY46 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Ift140E9PY46 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Ift140E9PY46 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
Ift140E9PY46 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC28.16■■■□□ 2.1
Ift140E9PY46 Gm38308-201ENSMUST00000194934 1809 ntBASIC28.16■■■□□ 2.1
Ift140E9PY46 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ift140E9PY46 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ift140E9PY46 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ift140E9PY46 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
Ift140E9PY46 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Ift140E9PY46 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ift140E9PY46 Gm11452-201ENSMUST00000122376 690 ntBASIC28.15■■■□□ 2.1
Ift140E9PY46 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC28.15■■■□□ 2.1
Ift140E9PY46 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ift140E9PY46 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Ift140E9PY46 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ift140E9PY46 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ift140E9PY46 Gm15372-201ENSMUST00000120729 834 ntBASIC28.15■■■□□ 2.1
Ift140E9PY46 Gm10052-201ENSMUST00000168019 960 ntBASIC28.15■■■□□ 2.1
Ift140E9PY46 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ift140E9PY46 Gm7729-201ENSMUST00000050143 801 ntBASIC28.15■■■□□ 2.1
Ift140E9PY46 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ift140E9PY46 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Ift140E9PY46 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ift140E9PY46 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ift140E9PY46 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Ift140E9PY46 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC28.14■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 148.8 ms