Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Gm21814-202ENSMUST00000203277 873 ntBASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Gm11643-201ENSMUST00000119578 864 ntBASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh17E9PXF0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Gm12382-201ENSMUST00000122005 922 ntBASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh17E9PXF0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Gm9987-201ENSMUST00000069768 567 ntBASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh17E9PXF0 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Gm43799-201ENSMUST00000201845 579 ntBASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh17E9PXF0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms