Protein–RNA interactions for Protein: E9PW43

Gm10320, Protein transport protein Sec61 subunit beta, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10320E9PW43 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.27□□□□□ -0.61
Gm10320E9PW43 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10320E9PW43 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.25□□□□□ -0.61
Gm10320E9PW43 Dancr-204ENSMUST00000132389 2347 ntBASIC11.25□□□□□ -0.61
Gm10320E9PW43 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Gm44544-201ENSMUST00000207052 1844 ntBASIC11.25□□□□□ -0.61
Gm10320E9PW43 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.25□□□□□ -0.61
Gm10320E9PW43 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Gm10320E9PW43 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm10320E9PW43 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm10320E9PW43 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Gm10320E9PW43 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm10320E9PW43 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm10320E9PW43 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Gm10320E9PW43 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.23□□□□□ -0.61
Gm10320E9PW43 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm10320E9PW43 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC11.23□□□□□ -0.61
Gm10320E9PW43 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Gm10320E9PW43 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms