Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Brpf3B2KF05 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.76■□□□□ 0.75
Brpf3B2KF05 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Gm22325-201ENSMUST00000158904 308 ntBASIC19.75■□□□□ 0.75
Brpf3B2KF05 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brpf3B2KF05 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Reep4-203ENSMUST00000226563 1444 ntBASIC19.74■□□□□ 0.75
Brpf3B2KF05 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brpf3B2KF05 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Brpf3B2KF05 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Gm13241-201ENSMUST00000094493 780 ntBASIC19.73■□□□□ 0.75
Brpf3B2KF05 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.73■□□□□ 0.75
Brpf3B2KF05 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brpf3B2KF05 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brpf3B2KF05 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brpf3B2KF05 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Brpf3B2KF05 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brpf3B2KF05 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brpf3B2KF05 Gm27454-201ENSMUST00000185090 204 ntBASIC19.71■□□□□ 0.75
Brpf3B2KF05 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.71■□□□□ 0.75
Brpf3B2KF05 Gm43017-201ENSMUST00000198296 752 ntBASIC19.71■□□□□ 0.75
Brpf3B2KF05 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brpf3B2KF05 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Brpf3B2KF05 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brpf3B2KF05 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Brpf3B2KF05 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brpf3B2KF05 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brpf3B2KF05 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.71■□□□□ 0.75
Brpf3B2KF05 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Brpf3B2KF05 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.7■□□□□ 0.74
Brpf3B2KF05 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.7■□□□□ 0.74
Brpf3B2KF05 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brpf3B2KF05 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brpf3B2KF05 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.7■□□□□ 0.74
Brpf3B2KF05 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brpf3B2KF05 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Brpf3B2KF05 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brpf3B2KF05 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms