Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm10013-201ENSMUST00000106074 672 ntBASIC19.9■□□□□ 0.78
Scn3aA2ASI5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.9■□□□□ 0.78
Scn3aA2ASI5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.9■□□□□ 0.78
Scn3aA2ASI5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn3aA2ASI5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn3aA2ASI5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Scn3aA2ASI5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Scn3aA2ASI5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn3aA2ASI5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Scn3aA2ASI5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Gm2274-201ENSMUST00000184539 609 ntBASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Gm9731-201ENSMUST00000209480 747 ntBASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn3aA2ASI5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Gm23634-201ENSMUST00000175071 91 ntBASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Gm7791-201ENSMUST00000219066 539 ntBASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn3aA2ASI5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn3aA2ASI5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn3aA2ASI5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn3aA2ASI5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn3aA2ASI5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn3aA2ASI5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn3aA2ASI5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Scn3aA2ASI5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn3aA2ASI5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn3aA2ASI5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn3aA2ASI5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn3aA2ASI5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn3aA2ASI5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn3aA2ASI5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn3aA2ASI5 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.86■□□□□ 0.77
Scn3aA2ASI5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Scn3aA2ASI5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn3aA2ASI5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Scn3aA2ASI5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn3aA2ASI5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn3aA2ASI5 Gm16061-201ENSMUST00000122167 857 ntBASIC19.86■□□□□ 0.77
Scn3aA2ASI5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn3aA2ASI5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn3aA2ASI5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn3aA2ASI5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn3aA2ASI5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Scn3aA2ASI5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.84■□□□□ 0.77
Scn3aA2ASI5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Mir8112-201ENSMUST00000184382 131 ntBASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn3aA2ASI5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms