Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Shroom2A2ALU4 Gm8097-201ENSMUST00000117903 829 ntBASIC28.24■■■□□ 2.11
Shroom2A2ALU4 Gm7862-201ENSMUST00000121461 292 ntBASIC28.24■■■□□ 2.11
Shroom2A2ALU4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Shroom2A2ALU4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Shroom2A2ALU4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Shroom2A2ALU4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Shroom2A2ALU4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC28.24■■■□□ 2.11
Shroom2A2ALU4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Shroom2A2ALU4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Shroom2A2ALU4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC28.23■■■□□ 2.11
Shroom2A2ALU4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Shroom2A2ALU4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Shroom2A2ALU4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC28.21■■■□□ 2.11
Shroom2A2ALU4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC28.21■■■□□ 2.11
Shroom2A2ALU4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC28.21■■■□□ 2.11
Shroom2A2ALU4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC28.21■■■□□ 2.11
Shroom2A2ALU4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Shroom2A2ALU4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Shroom2A2ALU4 Mir5126-201ENSMUST00000175513 77 ntBASIC28.21■■■□□ 2.11
Shroom2A2ALU4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC28.21■■■□□ 2.11
Shroom2A2ALU4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Shroom2A2ALU4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Shroom2A2ALU4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Shroom2A2ALU4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
Shroom2A2ALU4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC28.21■■■□□ 2.11
Shroom2A2ALU4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Shroom2A2ALU4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
Shroom2A2ALU4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
Shroom2A2ALU4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Shroom2A2ALU4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Shroom2A2ALU4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.11
Shroom2A2ALU4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC28.2■■■□□ 2.1
Shroom2A2ALU4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Shroom2A2ALU4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Shroom2A2ALU4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Shroom2A2ALU4 Gm13401-201ENSMUST00000117074 291 ntBASIC28.2■■■□□ 2.1
Shroom2A2ALU4 Gm42670-201ENSMUST00000201816 1292 ntBASIC28.2■■■□□ 2.1
Shroom2A2ALU4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Shroom2A2ALU4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Shroom2A2ALU4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Shroom2A2ALU4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Shroom2A2ALU4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Shroom2A2ALU4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Shroom2A2ALU4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Shroom2A2ALU4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Shroom2A2ALU4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Shroom2A2ALU4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Shroom2A2ALU4 Gm10175-201ENSMUST00000086013 645 ntBASIC28.19■■■□□ 2.1
Shroom2A2ALU4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Shroom2A2ALU4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Shroom2A2ALU4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Shroom2A2ALU4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Shroom2A2ALU4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Shroom2A2ALU4 Gm1818-201ENSMUST00000169406 1184 ntBASIC28.18■■■□□ 2.1
Shroom2A2ALU4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Shroom2A2ALU4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Shroom2A2ALU4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Shroom2A2ALU4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Shroom2A2ALU4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Shroom2A2ALU4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Shroom2A2ALU4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Shroom2A2ALU4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC28.17■■■□□ 2.1
Shroom2A2ALU4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC28.17■■■□□ 2.1
Shroom2A2ALU4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Shroom2A2ALU4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Shroom2A2ALU4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Shroom2A2ALU4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Shroom2A2ALU4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC28.16■■■□□ 2.1
Shroom2A2ALU4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
Shroom2A2ALU4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Shroom2A2ALU4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC28.16■■■□□ 2.1
Shroom2A2ALU4 Gm24513-201ENSMUST00000174964 138 ntBASIC28.16■■■□□ 2.1
Shroom2A2ALU4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC28.16■■■□□ 2.1
Shroom2A2ALU4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Shroom2A2ALU4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Shroom2A2ALU4 Gm43006-201ENSMUST00000197702 1602 ntBASIC28.16■■■□□ 2.1
Shroom2A2ALU4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Shroom2A2ALU4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Shroom2A2ALU4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Shroom2A2ALU4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Shroom2A2ALU4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC28.15■■■□□ 2.1
Shroom2A2ALU4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Shroom2A2ALU4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Shroom2A2ALU4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Shroom2A2ALU4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Shroom2A2ALU4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms