Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav12-1A0N8R1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav12-1A0N8R1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav12-1A0N8R1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav12-1A0N8R1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trav12-1A0N8R1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav12-1A0N8R1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav12-1A0N8R1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav12-1A0N8R1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Gm10033-202ENSMUST00000211874 928 ntBASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 268.3 ms