Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Gm29257-201ENSMUST00000186115 639 ntBASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.79□□□□□ -0.04
Lnp1A0A1B0GSK3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lnp1A0A1B0GSK3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lnp1A0A1B0GSK3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lnp1A0A1B0GSK3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Lnp1A0A1B0GSK3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lnp1A0A1B0GSK3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lnp1A0A1B0GSK3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lnp1A0A1B0GSK3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Lnp1A0A1B0GSK3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Lnp1A0A1B0GSK3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lnp1A0A1B0GSK3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lnp1A0A1B0GSK3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lnp1A0A1B0GSK3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.77□□□□□ -0.05
Lnp1A0A1B0GSK3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lnp1A0A1B0GSK3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lnp1A0A1B0GSK3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lnp1A0A1B0GSK3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lnp1A0A1B0GSK3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.77□□□□□ -0.05
Lnp1A0A1B0GSK3 Gm4968-201ENSMUST00000071458 858 ntBASIC14.77□□□□□ -0.05
Lnp1A0A1B0GSK3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lnp1A0A1B0GSK3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lnp1A0A1B0GSK3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lnp1A0A1B0GSK3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lnp1A0A1B0GSK3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lnp1A0A1B0GSK3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lnp1A0A1B0GSK3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Gm38285-201ENSMUST00000192928 922 ntBASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Zfp783-201ENSMUST00000095946 670 ntBASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lnp1A0A1B0GSK3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lnp1A0A1B0GSK3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.74□□□□□ -0.05
Lnp1A0A1B0GSK3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lnp1A0A1B0GSK3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms