Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Gm6365-201ENSMUST00000054711 744 ntBASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc194A0A140LIT1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc194A0A140LIT1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc194A0A140LIT1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc194A0A140LIT1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc194A0A140LIT1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc194A0A140LIT1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc194A0A140LIT1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc194A0A140LIT1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc194A0A140LIT1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc194A0A140LIT1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc194A0A140LIT1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc194A0A140LIT1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc194A0A140LIT1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc194A0A140LIT1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc194A0A140LIT1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc194A0A140LIT1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc194A0A140LIT1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc194A0A140LIT1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc194A0A140LIT1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc194A0A140LIT1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc194A0A140LIT1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Gm18284-201ENSMUST00000172604 624 ntBASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.65■□□□□ 0.42
Ccdc194A0A140LIT1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
Ccdc194A0A140LIT1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc194A0A140LIT1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.64■□□□□ 0.42
Ccdc194A0A140LIT1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc194A0A140LIT1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Gm7290-201ENSMUST00000104990 617 ntBASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Gm12918-201ENSMUST00000120234 636 ntBASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Gm15710-201ENSMUST00000121821 636 ntBASIC17.63■□□□□ 0.41
Ccdc194A0A140LIT1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms