Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Mir6982-201ENSMUST00000184354 68 ntBASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13n-4A0A0G2JG01 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13n-4A0A0G2JG01 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm27275-201ENSMUST00000184318 272 ntBASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav13n-4A0A0G2JG01 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13n-4A0A0G2JG01 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm12896-201ENSMUST00000118430 226 ntBASIC14.36□□□□□ -0.11
Trav13n-4A0A0G2JG01 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms