Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gm45412-201ENSMUST00000210217 2275 ntBASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-2A0A0G2JF93 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gm15546-201ENSMUST00000122095 826 ntBASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gm7417-201ENSMUST00000192950 473 ntBASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.79□□□□□ -0.52
Trav13n-2A0A0G2JF93 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-2A0A0G2JF93 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13n-2A0A0G2JF93 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13n-2A0A0G2JF93 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13n-2A0A0G2JF93 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13n-2A0A0G2JF93 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13n-2A0A0G2JF93 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13n-2A0A0G2JF93 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13n-2A0A0G2JF93 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gm5812-201ENSMUST00000061073 957 ntBASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gm10209-201ENSMUST00000203397 1607 ntBASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13n-2A0A0G2JF93 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms