Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9-4A0A0B4J1K2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav9-4A0A0B4J1K2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav9-4A0A0B4J1K2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9-4A0A0B4J1K2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9-4A0A0B4J1K2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms