Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Gm42778-201ENSMUST00000199644 553 ntBASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv16A0A0B4J1H3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Gm6420-201ENSMUST00000193885 723 ntBASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv16A0A0B4J1H3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Nespas-201ENSMUST00000143738 1083 ntBASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv16A0A0B4J1H3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv16A0A0B4J1H3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv16A0A0B4J1H3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms