Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Gm12382-201ENSMUST00000122005 922 ntBASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Gm22240-201ENSMUST00000175225 82 ntBASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
Trbv12-1A0A0B4J1H0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv12-1A0A0B4J1H0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv12-1A0A0B4J1H0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv12-1A0A0B4J1H0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms