Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv5A0A0B4J1G9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Gm9959-201ENSMUST00000068277 390 ntBASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv5A0A0B4J1G9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv5A0A0B4J1G9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv5A0A0B4J1G9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv5A0A0B4J1G9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.27□□□□□ -0.12
Trbv5A0A0B4J1G9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.27□□□□□ -0.12
Trbv5A0A0B4J1G9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv5A0A0B4J1G9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv5A0A0B4J1G9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv5A0A0B4J1G9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Trbv5A0A0B4J1G9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv5A0A0B4J1G9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv5A0A0B4J1G9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv5A0A0B4J1G9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv5A0A0B4J1G9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms