Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6d-5A0A075B6B9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6d-5A0A075B6B9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6d-5A0A075B6B9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Gm13146-201ENSMUST00000118508 780 ntBASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6d-5A0A075B6B9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav6d-5A0A075B6B9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms