Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav9d-1A0A075B699 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-1A0A075B699 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-1A0A075B699 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-1A0A075B699 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-1A0A075B699 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-1A0A075B699 Gm22325-201ENSMUST00000158904 308 ntBASIC13.71□□□□□ -0.21
Trav9d-1A0A075B699 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav9d-1A0A075B699 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-1A0A075B699 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-1A0A075B699 Gm5874-201ENSMUST00000096101 508 ntBASIC13.71□□□□□ -0.21
Trav9d-1A0A075B699 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-1A0A075B699 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav9d-1A0A075B699 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav9d-1A0A075B699 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav9d-1A0A075B699 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-1A0A075B699 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-1A0A075B699 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms