Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav18A0A075B656 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 AV356131-201ENSMUST00000206201 750 ntBASIC14.55□□□□□ -0.08
Trav18A0A075B656 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav18A0A075B656 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.55□□□□□ -0.08
Trav18A0A075B656 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Gm8969-201ENSMUST00000199694 526 ntBASIC14.54□□□□□ -0.08
Trav18A0A075B656 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Idnk-204ENSMUST00000226010 1898 ntBASIC14.54□□□□□ -0.08
Trav18A0A075B656 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav18A0A075B656 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.53□□□□□ -0.08
Trav18A0A075B656 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.53□□□□□ -0.08
Trav18A0A075B656 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Trav18A0A075B656 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav18A0A075B656 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav18A0A075B656 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav18A0A075B656 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Trav18A0A075B656 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav18A0A075B656 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav18A0A075B656 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav18A0A075B656 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav18A0A075B656 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav18A0A075B656 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav18A0A075B656 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trav18A0A075B656 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav18A0A075B656 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trav18A0A075B656 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms