Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Gm14523-201ENSMUST00000117260 558 ntBASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12-3A0A075B648 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav12-3A0A075B648 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-3A0A075B648 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-3A0A075B648 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-3A0A075B648 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-3A0A075B648 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-3A0A075B648 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-3A0A075B648 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12-3A0A075B648 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12-3A0A075B648 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12-3A0A075B648 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav12-3A0A075B648 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12-3A0A075B648 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12-3A0A075B648 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12-3A0A075B648 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12-3A0A075B648 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trav12-3A0A075B648 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Trav12-3A0A075B648 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav12-3A0A075B648 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms