Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Idnk-204ENSMUST00000226010 1898 ntBASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav6-7-dv9A0A075B639 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-7-dv9A0A075B639 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-7-dv9A0A075B639 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Gm37179-201ENSMUST00000194862 823 ntBASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav6-7-dv9A0A075B639 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms