Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.29■□□□□ 0.2
Trav8n-2A0A075B633 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8n-2A0A075B633 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8n-2A0A075B633 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Trav8n-2A0A075B633 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8n-2A0A075B633 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8n-2A0A075B633 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8n-2A0A075B633 Gm9103-201ENSMUST00000119371 405 ntBASIC16.27■□□□□ 0.2
Trav8n-2A0A075B633 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trav8n-2A0A075B633 Gm27389-201ENSMUST00000183622 195 ntBASIC16.27■□□□□ 0.2
Trav8n-2A0A075B633 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8n-2A0A075B633 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8n-2A0A075B633 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.27■□□□□ 0.2
Trav8n-2A0A075B633 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8n-2A0A075B633 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav8n-2A0A075B633 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trav8n-2A0A075B633 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Trav8n-2A0A075B633 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav8n-2A0A075B633 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav8n-2A0A075B633 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Gm7638-201ENSMUST00000121348 967 ntBASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav8n-2A0A075B633 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav8n-2A0A075B633 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Gm24841-201ENSMUST00000158676 357 ntBASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms