Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7n-4A0A075B620 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7n-4A0A075B620 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.48□□□□□ -0.25
Trav7n-4A0A075B620 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7n-4A0A075B620 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7n-4A0A075B620 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav7n-4A0A075B620 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7n-4A0A075B620 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7n-4A0A075B620 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7n-4A0A075B620 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7n-4A0A075B620 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7n-4A0A075B620 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7n-4A0A075B620 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7n-4A0A075B620 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7n-4A0A075B620 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav7n-4A0A075B620 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms