Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-6A0A075B603 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-6A0A075B603 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-6A0A075B603 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-6A0A075B603 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-6A0A075B603 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-6A0A075B603 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-6A0A075B603 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-6A0A075B603 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Trav6-6A0A075B603 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6-6A0A075B603 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-6A0A075B603 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6-6A0A075B603 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms