Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Hdac6Q9Z2V5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Hdac6Q9Z2V5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Hdac6Q9Z2V5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Hdac6Q9Z2V5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Hdac6Q9Z2V5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Hdac6Q9Z2V5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.61■■■□□ 2.65
Hdac6Q9Z2V5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Hdac6Q9Z2V5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Hdac6Q9Z2V5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Hdac6Q9Z2V5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC31.58■■■□□ 2.65
Hdac6Q9Z2V5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Hdac6Q9Z2V5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.56■■■□□ 2.64
Hdac6Q9Z2V5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Hdac6Q9Z2V5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Hdac6Q9Z2V5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Hdac6Q9Z2V5 Gm11175-201ENSMUST00000116172 543 ntBASIC31.51■■■□□ 2.63
Hdac6Q9Z2V5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Hdac6Q9Z2V5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Hdac6Q9Z2V5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC31.49■■■□□ 2.63
Hdac6Q9Z2V5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Hdac6Q9Z2V5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Hdac6Q9Z2V5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Hdac6Q9Z2V5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.47■■■□□ 2.63
Hdac6Q9Z2V5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Hdac6Q9Z2V5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
Hdac6Q9Z2V5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Hdac6Q9Z2V5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Hdac6Q9Z2V5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31.46■■■□□ 2.63
Hdac6Q9Z2V5 Mir6538-201ENSMUST00000183713 110 ntBASIC31.46■■■□□ 2.63
Hdac6Q9Z2V5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.45■■■□□ 2.63
Hdac6Q9Z2V5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Hdac6Q9Z2V5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
Hdac6Q9Z2V5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC31.42■■■□□ 2.62
Hdac6Q9Z2V5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
Hdac6Q9Z2V5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Hdac6Q9Z2V5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Hdac6Q9Z2V5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Hdac6Q9Z2V5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
Hdac6Q9Z2V5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Hdac6Q9Z2V5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Hdac6Q9Z2V5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Hdac6Q9Z2V5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Hdac6Q9Z2V5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Hdac6Q9Z2V5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.36■■■□□ 2.61
Hdac6Q9Z2V5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Hdac6Q9Z2V5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Hdac6Q9Z2V5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Hdac6Q9Z2V5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC31.33■■■□□ 2.61
Hdac6Q9Z2V5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Hdac6Q9Z2V5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Hdac6Q9Z2V5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Hdac6Q9Z2V5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Hdac6Q9Z2V5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Hdac6Q9Z2V5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Hdac6Q9Z2V5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC31.28■■■□□ 2.6
Hdac6Q9Z2V5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
Hdac6Q9Z2V5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Hdac6Q9Z2V5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
Hdac6Q9Z2V5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Hdac6Q9Z2V5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
Hdac6Q9Z2V5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Hdac6Q9Z2V5 Cap2-205ENSMUST00000225824 1634 ntBASIC31.24■■■□□ 2.59
Hdac6Q9Z2V5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Hdac6Q9Z2V5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.2■■■□□ 2.59
Hdac6Q9Z2V5 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.2■■■□□ 2.59
Hdac6Q9Z2V5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Hdac6Q9Z2V5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Hdac6Q9Z2V5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Hdac6Q9Z2V5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Hdac6Q9Z2V5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Hdac6Q9Z2V5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Hdac6Q9Z2V5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC31.17■■■□□ 2.58
Hdac6Q9Z2V5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Hdac6Q9Z2V5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Hdac6Q9Z2V5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
Hdac6Q9Z2V5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC31.16■■■□□ 2.58
Hdac6Q9Z2V5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC31.15■■■□□ 2.58
Hdac6Q9Z2V5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.15■■■□□ 2.58
Hdac6Q9Z2V5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
Hdac6Q9Z2V5 Gm6311-201ENSMUST00000073790 878 ntBASIC31.14■■■□□ 2.58
Hdac6Q9Z2V5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
Hdac6Q9Z2V5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Hdac6Q9Z2V5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Hdac6Q9Z2V5 Gm30023-201ENSMUST00000197970 889 ntBASIC31.1■■■□□ 2.57
Hdac6Q9Z2V5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Hdac6Q9Z2V5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Hdac6Q9Z2V5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC31.09■■■□□ 2.57
Hdac6Q9Z2V5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Hdac6Q9Z2V5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Hdac6Q9Z2V5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Hdac6Q9Z2V5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC31.08■■■□□ 2.57
Hdac6Q9Z2V5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Hdac6Q9Z2V5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
Hdac6Q9Z2V5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
Hdac6Q9Z2V5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.05■■■□□ 2.56
Hdac6Q9Z2V5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Hdac6Q9Z2V5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Hdac6Q9Z2V5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Hdac6Q9Z2V5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms