Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sec61a2Q9JLR1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.67■■□□□ 1.06
Sec61a2Q9JLR1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sec61a2Q9JLR1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sec61a2Q9JLR1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sec61a2Q9JLR1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sec61a2Q9JLR1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sec61a2Q9JLR1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sec61a2Q9JLR1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sec61a2Q9JLR1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sec61a2Q9JLR1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sec61a2Q9JLR1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sec61a2Q9JLR1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sec61a2Q9JLR1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.62■■□□□ 1.05
Sec61a2Q9JLR1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sec61a2Q9JLR1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sec61a2Q9JLR1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Sec61a2Q9JLR1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sec61a2Q9JLR1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sec61a2Q9JLR1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sec61a2Q9JLR1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sec61a2Q9JLR1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Sec61a2Q9JLR1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sec61a2Q9JLR1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sec61a2Q9JLR1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sec61a2Q9JLR1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Sec61a2Q9JLR1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.58■■□□□ 1.05
Sec61a2Q9JLR1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sec61a2Q9JLR1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Sec61a2Q9JLR1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sec61a2Q9JLR1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sec61a2Q9JLR1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.57■■□□□ 1.04
Sec61a2Q9JLR1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sec61a2Q9JLR1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sec61a2Q9JLR1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.56■■□□□ 1.04
Sec61a2Q9JLR1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.56■■□□□ 1.04
Sec61a2Q9JLR1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sec61a2Q9JLR1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Sec61a2Q9JLR1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sec61a2Q9JLR1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.55■■□□□ 1.04
Sec61a2Q9JLR1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Sec61a2Q9JLR1 Gm24970-201ENSMUST00000175582 82 ntBASIC21.54■■□□□ 1.04
Sec61a2Q9JLR1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sec61a2Q9JLR1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sec61a2Q9JLR1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sec61a2Q9JLR1 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.53■■□□□ 1.04
Sec61a2Q9JLR1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.52■■□□□ 1.04
Sec61a2Q9JLR1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sec61a2Q9JLR1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.52■■□□□ 1.04
Sec61a2Q9JLR1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sec61a2Q9JLR1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sec61a2Q9JLR1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sec61a2Q9JLR1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sec61a2Q9JLR1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Sec61a2Q9JLR1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Sec61a2Q9JLR1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sec61a2Q9JLR1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sec61a2Q9JLR1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sec61a2Q9JLR1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sec61a2Q9JLR1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.49■■□□□ 1.03
Sec61a2Q9JLR1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sec61a2Q9JLR1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.49■■□□□ 1.03
Sec61a2Q9JLR1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sec61a2Q9JLR1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sec61a2Q9JLR1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sec61a2Q9JLR1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.48■■□□□ 1.03
Sec61a2Q9JLR1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sec61a2Q9JLR1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sec61a2Q9JLR1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sec61a2Q9JLR1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sec61a2Q9JLR1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sec61a2Q9JLR1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sec61a2Q9JLR1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sec61a2Q9JLR1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sec61a2Q9JLR1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Sec61a2Q9JLR1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.46■■□□□ 1.03
Sec61a2Q9JLR1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Sec61a2Q9JLR1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sec61a2Q9JLR1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Sec61a2Q9JLR1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sec61a2Q9JLR1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sec61a2Q9JLR1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sec61a2Q9JLR1 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.44■■□□□ 1.02
Sec61a2Q9JLR1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sec61a2Q9JLR1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Sec61a2Q9JLR1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sec61a2Q9JLR1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.43■■□□□ 1.02
Sec61a2Q9JLR1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sec61a2Q9JLR1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sec61a2Q9JLR1 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.42■■□□□ 1.02
Sec61a2Q9JLR1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sec61a2Q9JLR1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sec61a2Q9JLR1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sec61a2Q9JLR1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.4■■□□□ 1.02
Sec61a2Q9JLR1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sec61a2Q9JLR1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sec61a2Q9JLR1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sec61a2Q9JLR1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.37■■□□□ 1.01
Sec61a2Q9JLR1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sec61a2Q9JLR1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms