Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Tdp2Q9JJX7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.05■■□□□ 1.44
Tdp2Q9JJX7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.05■■□□□ 1.44
Tdp2Q9JJX7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Tdp2Q9JJX7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.04■■□□□ 1.44
Tdp2Q9JJX7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Tdp2Q9JJX7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Tdp2Q9JJX7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Tdp2Q9JJX7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tdp2Q9JJX7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Tdp2Q9JJX7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Tdp2Q9JJX7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Tdp2Q9JJX7 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.01■■□□□ 1.43
Tdp2Q9JJX7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Tdp2Q9JJX7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Tdp2Q9JJX7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tdp2Q9JJX7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Tdp2Q9JJX7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tdp2Q9JJX7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tdp2Q9JJX7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tdp2Q9JJX7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Tdp2Q9JJX7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
Tdp2Q9JJX7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Tdp2Q9JJX7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Tdp2Q9JJX7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Tdp2Q9JJX7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Tdp2Q9JJX7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Tdp2Q9JJX7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Tdp2Q9JJX7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Tdp2Q9JJX7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Tdp2Q9JJX7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.93■■□□□ 1.42
Tdp2Q9JJX7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Tdp2Q9JJX7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Tdp2Q9JJX7 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.92■■□□□ 1.42
Tdp2Q9JJX7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Tdp2Q9JJX7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Tdp2Q9JJX7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Tdp2Q9JJX7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Tdp2Q9JJX7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Tdp2Q9JJX7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.9■■□□□ 1.42
Tdp2Q9JJX7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Tdp2Q9JJX7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Tdp2Q9JJX7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Tdp2Q9JJX7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.89■■□□□ 1.41
Tdp2Q9JJX7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Tdp2Q9JJX7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.89■■□□□ 1.41
Tdp2Q9JJX7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Tdp2Q9JJX7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Tdp2Q9JJX7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Tdp2Q9JJX7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Tdp2Q9JJX7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Tdp2Q9JJX7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Tdp2Q9JJX7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tdp2Q9JJX7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Tdp2Q9JJX7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.86■■□□□ 1.41
Tdp2Q9JJX7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Tdp2Q9JJX7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Tdp2Q9JJX7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Tdp2Q9JJX7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Tdp2Q9JJX7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Tdp2Q9JJX7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.84■■□□□ 1.41
Tdp2Q9JJX7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Tdp2Q9JJX7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Tdp2Q9JJX7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Tdp2Q9JJX7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
Tdp2Q9JJX7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.83■■□□□ 1.41
Tdp2Q9JJX7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.82■■□□□ 1.4
Tdp2Q9JJX7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Tdp2Q9JJX7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Tdp2Q9JJX7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Tdp2Q9JJX7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Tdp2Q9JJX7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tdp2Q9JJX7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Tdp2Q9JJX7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Tdp2Q9JJX7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tdp2Q9JJX7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tdp2Q9JJX7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Tdp2Q9JJX7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Tdp2Q9JJX7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tdp2Q9JJX7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.79■■□□□ 1.4
Tdp2Q9JJX7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tdp2Q9JJX7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tdp2Q9JJX7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tdp2Q9JJX7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tdp2Q9JJX7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tdp2Q9JJX7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.77■■□□□ 1.4
Tdp2Q9JJX7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tdp2Q9JJX7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tdp2Q9JJX7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.76■■□□□ 1.39
Tdp2Q9JJX7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.75■■□□□ 1.39
Tdp2Q9JJX7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Tdp2Q9JJX7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tdp2Q9JJX7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tdp2Q9JJX7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Tdp2Q9JJX7 Gm45855-201ENSMUST00000212546 880 ntBASIC23.71■■□□□ 1.39
Tdp2Q9JJX7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.71■■□□□ 1.39
Tdp2Q9JJX7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Tdp2Q9JJX7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tdp2Q9JJX7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tdp2Q9JJX7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms