Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Rhox4bQ9JI43 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Rhox4bQ9JI43 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rhox4bQ9JI43 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rhox4bQ9JI43 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhox4bQ9JI43 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhox4bQ9JI43 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhox4bQ9JI43 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhox4bQ9JI43 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rhox4bQ9JI43 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.29■□□□□ 0.68
Rhox4bQ9JI43 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rhox4bQ9JI43 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rhox4bQ9JI43 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rhox4bQ9JI43 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rhox4bQ9JI43 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.27■□□□□ 0.68
Rhox4bQ9JI43 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rhox4bQ9JI43 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rhox4bQ9JI43 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rhox4bQ9JI43 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rhox4bQ9JI43 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rhox4bQ9JI43 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rhox4bQ9JI43 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rhox4bQ9JI43 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rhox4bQ9JI43 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rhox4bQ9JI43 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Rhox4bQ9JI43 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rhox4bQ9JI43 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rhox4bQ9JI43 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.25■□□□□ 0.67
Rhox4bQ9JI43 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rhox4bQ9JI43 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rhox4bQ9JI43 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rhox4bQ9JI43 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rhox4bQ9JI43 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rhox4bQ9JI43 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rhox4bQ9JI43 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rhox4bQ9JI43 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rhox4bQ9JI43 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rhox4bQ9JI43 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.22■□□□□ 0.67
Rhox4bQ9JI43 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhox4bQ9JI43 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhox4bQ9JI43 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhox4bQ9JI43 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rhox4bQ9JI43 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rhox4bQ9JI43 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rhox4bQ9JI43 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.19■□□□□ 0.66
Rhox4bQ9JI43 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rhox4bQ9JI43 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rhox4bQ9JI43 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rhox4bQ9JI43 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rhox4bQ9JI43 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Rhox4bQ9JI43 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rhox4bQ9JI43 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rhox4bQ9JI43 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rhox4bQ9JI43 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rhox4bQ9JI43 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rhox4bQ9JI43 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rhox4bQ9JI43 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rhox4bQ9JI43 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.15■□□□□ 0.66
Rhox4bQ9JI43 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rhox4bQ9JI43 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rhox4bQ9JI43 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Rhox4bQ9JI43 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rhox4bQ9JI43 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.13■□□□□ 0.65
Rhox4bQ9JI43 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rhox4bQ9JI43 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rhox4bQ9JI43 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rhox4bQ9JI43 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rhox4bQ9JI43 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.13■□□□□ 0.65
Rhox4bQ9JI43 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rhox4bQ9JI43 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rhox4bQ9JI43 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rhox4bQ9JI43 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rhox4bQ9JI43 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rhox4bQ9JI43 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rhox4bQ9JI43 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rhox4bQ9JI43 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rhox4bQ9JI43 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rhox4bQ9JI43 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rhox4bQ9JI43 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rhox4bQ9JI43 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rhox4bQ9JI43 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rhox4bQ9JI43 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Rhox4bQ9JI43 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rhox4bQ9JI43 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rhox4bQ9JI43 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rhox4bQ9JI43 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Rhox4bQ9JI43 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rhox4bQ9JI43 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rhox4bQ9JI43 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rhox4bQ9JI43 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Rhox4bQ9JI43 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rhox4bQ9JI43 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rhox4bQ9JI43 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rhox4bQ9JI43 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rhox4bQ9JI43 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rhox4bQ9JI43 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rhox4bQ9JI43 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rhox4bQ9JI43 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rhox4bQ9JI43 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rhox4bQ9JI43 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms