Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmem88Q9D0N8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Tmem88Q9D0N8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem88Q9D0N8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem88Q9D0N8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Tmem88Q9D0N8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Tmem88Q9D0N8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem88Q9D0N8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem88Q9D0N8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem88Q9D0N8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Tmem88Q9D0N8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.94■□□□□ 0.62
Tmem88Q9D0N8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Tmem88Q9D0N8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem88Q9D0N8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmem88Q9D0N8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmem88Q9D0N8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Tmem88Q9D0N8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.93■□□□□ 0.62
Tmem88Q9D0N8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem88Q9D0N8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem88Q9D0N8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Tmem88Q9D0N8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.92■□□□□ 0.62
Tmem88Q9D0N8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem88Q9D0N8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Tmem88Q9D0N8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.91■□□□□ 0.62
Tmem88Q9D0N8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem88Q9D0N8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem88Q9D0N8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.9■□□□□ 0.62
Tmem88Q9D0N8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem88Q9D0N8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem88Q9D0N8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem88Q9D0N8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem88Q9D0N8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Tmem88Q9D0N8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tmem88Q9D0N8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmem88Q9D0N8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem88Q9D0N8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem88Q9D0N8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem88Q9D0N8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem88Q9D0N8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem88Q9D0N8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem88Q9D0N8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.86■□□□□ 0.61
Tmem88Q9D0N8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Tmem88Q9D0N8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem88Q9D0N8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem88Q9D0N8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem88Q9D0N8 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.85■□□□□ 0.61
Tmem88Q9D0N8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem88Q9D0N8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem88Q9D0N8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem88Q9D0N8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.84■□□□□ 0.61
Tmem88Q9D0N8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tmem88Q9D0N8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmem88Q9D0N8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmem88Q9D0N8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmem88Q9D0N8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Tmem88Q9D0N8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmem88Q9D0N8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.83■□□□□ 0.6
Tmem88Q9D0N8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmem88Q9D0N8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tmem88Q9D0N8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem88Q9D0N8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.82■□□□□ 0.6
Tmem88Q9D0N8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem88Q9D0N8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem88Q9D0N8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem88Q9D0N8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Tmem88Q9D0N8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tmem88Q9D0N8 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.81■□□□□ 0.6
Tmem88Q9D0N8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem88Q9D0N8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Tmem88Q9D0N8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem88Q9D0N8 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.81■□□□□ 0.6
Tmem88Q9D0N8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem88Q9D0N8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tmem88Q9D0N8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Tmem88Q9D0N8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmem88Q9D0N8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmem88Q9D0N8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tmem88Q9D0N8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmem88Q9D0N8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tmem88Q9D0N8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmem88Q9D0N8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Tmem88Q9D0N8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmem88Q9D0N8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Tmem88Q9D0N8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmem88Q9D0N8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.76■□□□□ 0.59
Tmem88Q9D0N8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmem88Q9D0N8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmem88Q9D0N8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Tmem88Q9D0N8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmem88Q9D0N8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.74■□□□□ 0.59
Tmem88Q9D0N8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tmem88Q9D0N8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmem88Q9D0N8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem88Q9D0N8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem88Q9D0N8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem88Q9D0N8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem88Q9D0N8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem88Q9D0N8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem88Q9D0N8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem88Q9D0N8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms