Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf135Q9CWS1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf135Q9CWS1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rnf135Q9CWS1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Rnf135Q9CWS1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf135Q9CWS1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf135Q9CWS1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf135Q9CWS1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Rnf135Q9CWS1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf135Q9CWS1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf135Q9CWS1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Rnf135Q9CWS1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rnf135Q9CWS1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Rnf135Q9CWS1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rnf135Q9CWS1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Rnf135Q9CWS1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.22■■□□□ 1.63
Rnf135Q9CWS1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf135Q9CWS1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf135Q9CWS1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf135Q9CWS1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf135Q9CWS1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf135Q9CWS1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf135Q9CWS1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf135Q9CWS1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf135Q9CWS1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf135Q9CWS1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf135Q9CWS1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rnf135Q9CWS1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.19■■□□□ 1.62
Rnf135Q9CWS1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rnf135Q9CWS1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rnf135Q9CWS1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rnf135Q9CWS1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.17■■□□□ 1.62
Rnf135Q9CWS1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rnf135Q9CWS1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rnf135Q9CWS1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Rnf135Q9CWS1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rnf135Q9CWS1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Rnf135Q9CWS1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Rnf135Q9CWS1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf135Q9CWS1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf135Q9CWS1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf135Q9CWS1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf135Q9CWS1 Gm9397-201ENSMUST00000200125 605 ntBASIC25.12■■□□□ 1.61
Rnf135Q9CWS1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Rnf135Q9CWS1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rnf135Q9CWS1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rnf135Q9CWS1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Rnf135Q9CWS1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rnf135Q9CWS1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rnf135Q9CWS1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Rnf135Q9CWS1 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.09■■□□□ 1.61
Rnf135Q9CWS1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Rnf135Q9CWS1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rnf135Q9CWS1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rnf135Q9CWS1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.07■■□□□ 1.6
Rnf135Q9CWS1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
Rnf135Q9CWS1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.06■■□□□ 1.6
Rnf135Q9CWS1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Rnf135Q9CWS1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Rnf135Q9CWS1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Rnf135Q9CWS1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rnf135Q9CWS1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rnf135Q9CWS1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rnf135Q9CWS1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rnf135Q9CWS1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.04■■□□□ 1.6
Rnf135Q9CWS1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.03■■□□□ 1.6
Rnf135Q9CWS1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rnf135Q9CWS1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rnf135Q9CWS1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rnf135Q9CWS1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Rnf135Q9CWS1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rnf135Q9CWS1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rnf135Q9CWS1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rnf135Q9CWS1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.01■■□□□ 1.59
Rnf135Q9CWS1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rnf135Q9CWS1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rnf135Q9CWS1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rnf135Q9CWS1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rnf135Q9CWS1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25■■□□□ 1.59
Rnf135Q9CWS1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rnf135Q9CWS1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
Rnf135Q9CWS1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Rnf135Q9CWS1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rnf135Q9CWS1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.98■■□□□ 1.59
Rnf135Q9CWS1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.97■■□□□ 1.59
Rnf135Q9CWS1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rnf135Q9CWS1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rnf135Q9CWS1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.96■■□□□ 1.59
Rnf135Q9CWS1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rnf135Q9CWS1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rnf135Q9CWS1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Rnf135Q9CWS1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.94■■□□□ 1.58
Rnf135Q9CWS1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Rnf135Q9CWS1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rnf135Q9CWS1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rnf135Q9CWS1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
Rnf135Q9CWS1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.88■■□□□ 1.57
Rnf135Q9CWS1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Rnf135Q9CWS1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Rnf135Q9CWS1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms