Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.41■■□□□ 1.34
Trim16Q99PP9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim16Q99PP9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim16Q99PP9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim16Q99PP9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.4■■□□□ 1.34
Trim16Q99PP9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim16Q99PP9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim16Q99PP9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim16Q99PP9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim16Q99PP9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
Trim16Q99PP9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
Trim16Q99PP9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Trim16Q99PP9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.38■■□□□ 1.33
Trim16Q99PP9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.37■■□□□ 1.33
Trim16Q99PP9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim16Q99PP9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Trim16Q99PP9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim16Q99PP9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim16Q99PP9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trim16Q99PP9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
Trim16Q99PP9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim16Q99PP9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim16Q99PP9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
Trim16Q99PP9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim16Q99PP9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim16Q99PP9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trim16Q99PP9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Trim16Q99PP9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.33■■□□□ 1.33
Trim16Q99PP9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trim16Q99PP9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.32■■□□□ 1.32
Trim16Q99PP9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.32■■□□□ 1.32
Trim16Q99PP9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim16Q99PP9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim16Q99PP9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
Trim16Q99PP9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trim16Q99PP9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trim16Q99PP9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim16Q99PP9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim16Q99PP9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trim16Q99PP9 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.29■■□□□ 1.32
Trim16Q99PP9 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.29■■□□□ 1.32
Trim16Q99PP9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim16Q99PP9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Trim16Q99PP9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim16Q99PP9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.27■■□□□ 1.32
Trim16Q99PP9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim16Q99PP9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim16Q99PP9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.26■■□□□ 1.31
Trim16Q99PP9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim16Q99PP9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim16Q99PP9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trim16Q99PP9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim16Q99PP9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trim16Q99PP9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.25■■□□□ 1.31
Trim16Q99PP9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Trim16Q99PP9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim16Q99PP9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim16Q99PP9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.23■■□□□ 1.31
Trim16Q99PP9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Trim16Q99PP9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Trim16Q99PP9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.23■■□□□ 1.31
Trim16Q99PP9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
Trim16Q99PP9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim16Q99PP9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trim16Q99PP9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.21■■□□□ 1.31
Trim16Q99PP9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.21■■□□□ 1.31
Trim16Q99PP9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim16Q99PP9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Trim16Q99PP9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim16Q99PP9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim16Q99PP9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim16Q99PP9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim16Q99PP9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim16Q99PP9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim16Q99PP9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim16Q99PP9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Trim16Q99PP9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trim16Q99PP9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trim16Q99PP9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim16Q99PP9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trim16Q99PP9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim16Q99PP9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.17■■□□□ 1.3
Trim16Q99PP9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Trim16Q99PP9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim16Q99PP9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim16Q99PP9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim16Q99PP9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim16Q99PP9 Amer2-203ENSMUST00000225247 2662 ntBASIC23.15■■□□□ 1.3
Trim16Q99PP9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.14■■□□□ 1.3
Trim16Q99PP9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Trim16Q99PP9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Trim16Q99PP9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim16Q99PP9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Trim16Q99PP9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.12■■□□□ 1.29
Trim16Q99PP9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trim16Q99PP9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.11■■□□□ 1.29
Trim16Q99PP9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.1■■□□□ 1.29
Trim16Q99PP9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim16Q99PP9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim16Q99PP9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 1261.4 ms