Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhgb4Q91XX6 Zfp131-205ENSMUST00000223812 663 ntBASIC25.77■■□□□ 1.72
Pcdhgb4Q91XX6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.76■■□□□ 1.71
Pcdhgb4Q91XX6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhgb4Q91XX6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhgb4Q91XX6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhgb4Q91XX6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhgb4Q91XX6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhgb4Q91XX6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.73■■□□□ 1.71
Pcdhgb4Q91XX6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhgb4Q91XX6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhgb4Q91XX6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhgb4Q91XX6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhgb4Q91XX6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhgb4Q91XX6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.71■■□□□ 1.71
Pcdhgb4Q91XX6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.7■■□□□ 1.7
Pcdhgb4Q91XX6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.7■■□□□ 1.7
Pcdhgb4Q91XX6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhgb4Q91XX6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhgb4Q91XX6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhgb4Q91XX6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhgb4Q91XX6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhgb4Q91XX6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhgb4Q91XX6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhgb4Q91XX6 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.66■■□□□ 1.7
Pcdhgb4Q91XX6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhgb4Q91XX6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.65■■□□□ 1.7
Pcdhgb4Q91XX6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.64■■□□□ 1.7
Pcdhgb4Q91XX6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhgb4Q91XX6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.63■■□□□ 1.69
Pcdhgb4Q91XX6 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.63■■□□□ 1.69
Pcdhgb4Q91XX6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
Pcdhgb4Q91XX6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Pcdhgb4Q91XX6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
Pcdhgb4Q91XX6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhgb4Q91XX6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhgb4Q91XX6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.61■■□□□ 1.69
Pcdhgb4Q91XX6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
Pcdhgb4Q91XX6 Gm9397-201ENSMUST00000200125 605 ntBASIC25.6■■□□□ 1.69
Pcdhgb4Q91XX6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhgb4Q91XX6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhgb4Q91XX6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhgb4Q91XX6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhgb4Q91XX6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhgb4Q91XX6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhgb4Q91XX6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Pcdhgb4Q91XX6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhgb4Q91XX6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhgb4Q91XX6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.56■■□□□ 1.68
Pcdhgb4Q91XX6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhgb4Q91XX6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhgb4Q91XX6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhgb4Q91XX6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhgb4Q91XX6 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.54■■□□□ 1.68
Pcdhgb4Q91XX6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhgb4Q91XX6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Pcdhgb4Q91XX6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhgb4Q91XX6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.52■■□□□ 1.68
Pcdhgb4Q91XX6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhgb4Q91XX6 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.51■■□□□ 1.67
Pcdhgb4Q91XX6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhgb4Q91XX6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhgb4Q91XX6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhgb4Q91XX6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.5■■□□□ 1.67
Pcdhgb4Q91XX6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Pcdhgb4Q91XX6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.5■■□□□ 1.67
Pcdhgb4Q91XX6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhgb4Q91XX6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.48■■□□□ 1.67
Pcdhgb4Q91XX6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Pcdhgb4Q91XX6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Pcdhgb4Q91XX6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhgb4Q91XX6 Gm45855-201ENSMUST00000212546 880 ntBASIC25.47■■□□□ 1.67
Pcdhgb4Q91XX6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhgb4Q91XX6 Gm24970-201ENSMUST00000175582 82 ntBASIC25.45■■□□□ 1.66
Pcdhgb4Q91XX6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
Pcdhgb4Q91XX6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhgb4Q91XX6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhgb4Q91XX6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Pcdhgb4Q91XX6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhgb4Q91XX6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
Pcdhgb4Q91XX6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhgb4Q91XX6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhgb4Q91XX6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhgb4Q91XX6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhgb4Q91XX6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhgb4Q91XX6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.4■■□□□ 1.66
Pcdhgb4Q91XX6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Pcdhgb4Q91XX6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.37■■□□□ 1.65
Pcdhgb4Q91XX6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhgb4Q91XX6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhgb4Q91XX6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhgb4Q91XX6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhgb4Q91XX6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhgb4Q91XX6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.36■■□□□ 1.65
Pcdhgb4Q91XX6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhgb4Q91XX6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhgb4Q91XX6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhgb4Q91XX6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhgb4Q91XX6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.35■■□□□ 1.65
Pcdhgb4Q91XX6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms