Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf8Q8VC56 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Rnf8Q8VC56 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf8Q8VC56 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf8Q8VC56 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.1■■□□□ 1.29
Rnf8Q8VC56 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf8Q8VC56 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf8Q8VC56 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Rnf8Q8VC56 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf8Q8VC56 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf8Q8VC56 Gm45855-201ENSMUST00000212546 880 ntBASIC23.08■■□□□ 1.29
Rnf8Q8VC56 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf8Q8VC56 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.08■■□□□ 1.29
Rnf8Q8VC56 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Rnf8Q8VC56 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf8Q8VC56 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf8Q8VC56 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.06■■□□□ 1.28
Rnf8Q8VC56 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf8Q8VC56 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf8Q8VC56 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf8Q8VC56 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf8Q8VC56 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf8Q8VC56 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf8Q8VC56 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf8Q8VC56 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf8Q8VC56 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf8Q8VC56 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf8Q8VC56 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Rnf8Q8VC56 Gm24970-201ENSMUST00000175582 82 ntBASIC22.99■■□□□ 1.27
Rnf8Q8VC56 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.99■■□□□ 1.27
Rnf8Q8VC56 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf8Q8VC56 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rnf8Q8VC56 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf8Q8VC56 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf8Q8VC56 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf8Q8VC56 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.97■■□□□ 1.27
Rnf8Q8VC56 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf8Q8VC56 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf8Q8VC56 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf8Q8VC56 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf8Q8VC56 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf8Q8VC56 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Rnf8Q8VC56 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf8Q8VC56 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf8Q8VC56 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf8Q8VC56 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf8Q8VC56 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf8Q8VC56 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf8Q8VC56 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf8Q8VC56 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf8Q8VC56 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf8Q8VC56 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Rnf8Q8VC56 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.92■■□□□ 1.26
Rnf8Q8VC56 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.92■■□□□ 1.26
Rnf8Q8VC56 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.92■■□□□ 1.26
Rnf8Q8VC56 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Rnf8Q8VC56 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf8Q8VC56 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf8Q8VC56 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf8Q8VC56 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf8Q8VC56 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf8Q8VC56 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf8Q8VC56 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf8Q8VC56 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.9■■□□□ 1.26
Rnf8Q8VC56 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf8Q8VC56 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf8Q8VC56 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf8Q8VC56 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.89■■□□□ 1.25
Rnf8Q8VC56 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.89■■□□□ 1.25
Rnf8Q8VC56 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.88■■□□□ 1.25
Rnf8Q8VC56 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.88■■□□□ 1.25
Rnf8Q8VC56 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf8Q8VC56 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.88■■□□□ 1.25
Rnf8Q8VC56 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf8Q8VC56 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rnf8Q8VC56 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Rnf8Q8VC56 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.86■■□□□ 1.25
Rnf8Q8VC56 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rnf8Q8VC56 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rnf8Q8VC56 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.85■■□□□ 1.25
Rnf8Q8VC56 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf8Q8VC56 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf8Q8VC56 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf8Q8VC56 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rnf8Q8VC56 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rnf8Q8VC56 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.83■■□□□ 1.25
Rnf8Q8VC56 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.83■■□□□ 1.25
Rnf8Q8VC56 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Rnf8Q8VC56 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
Rnf8Q8VC56 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf8Q8VC56 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf8Q8VC56 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf8Q8VC56 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf8Q8VC56 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf8Q8VC56 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
Rnf8Q8VC56 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Rnf8Q8VC56 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf8Q8VC56 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Rnf8Q8VC56 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Rnf8Q8VC56 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms