Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Hmgcs1Q8JZK9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Hmgcs1Q8JZK9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Hmgcs1Q8JZK9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.17■■□□□ 1.3
Hmgcs1Q8JZK9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Hmgcs1Q8JZK9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.15■■□□□ 1.3
Hmgcs1Q8JZK9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hmgcs1Q8JZK9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Hmgcs1Q8JZK9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Hmgcs1Q8JZK9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
Hmgcs1Q8JZK9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Hmgcs1Q8JZK9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Hmgcs1Q8JZK9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Hmgcs1Q8JZK9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Hmgcs1Q8JZK9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hmgcs1Q8JZK9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Hmgcs1Q8JZK9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hmgcs1Q8JZK9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Hmgcs1Q8JZK9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hmgcs1Q8JZK9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.1■■□□□ 1.29
Hmgcs1Q8JZK9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hmgcs1Q8JZK9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hmgcs1Q8JZK9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hmgcs1Q8JZK9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hmgcs1Q8JZK9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs1Q8JZK9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs1Q8JZK9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs1Q8JZK9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs1Q8JZK9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs1Q8JZK9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Hmgcs1Q8JZK9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Hmgcs1Q8JZK9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Hmgcs1Q8JZK9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Hmgcs1Q8JZK9 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.07■■□□□ 1.28
Hmgcs1Q8JZK9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hmgcs1Q8JZK9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hmgcs1Q8JZK9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hmgcs1Q8JZK9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hmgcs1Q8JZK9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hmgcs1Q8JZK9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Hmgcs1Q8JZK9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hmgcs1Q8JZK9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hmgcs1Q8JZK9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hmgcs1Q8JZK9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Hmgcs1Q8JZK9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Hmgcs1Q8JZK9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Hmgcs1Q8JZK9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23■■□□□ 1.27
Hmgcs1Q8JZK9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hmgcs1Q8JZK9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hmgcs1Q8JZK9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hmgcs1Q8JZK9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.97■■□□□ 1.27
Hmgcs1Q8JZK9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.96■■□□□ 1.27
Hmgcs1Q8JZK9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.96■■□□□ 1.27
Hmgcs1Q8JZK9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.95■■□□□ 1.27
Hmgcs1Q8JZK9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Hmgcs1Q8JZK9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Hmgcs1Q8JZK9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Hmgcs1Q8JZK9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.94■■□□□ 1.26
Hmgcs1Q8JZK9 Zfp131-205ENSMUST00000223812 663 ntBASIC22.94■■□□□ 1.26
Hmgcs1Q8JZK9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.93■■□□□ 1.26
Hmgcs1Q8JZK9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.92■■□□□ 1.26
Hmgcs1Q8JZK9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hmgcs1Q8JZK9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hmgcs1Q8JZK9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hmgcs1Q8JZK9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Hmgcs1Q8JZK9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Hmgcs1Q8JZK9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
Hmgcs1Q8JZK9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.89■■□□□ 1.25
Hmgcs1Q8JZK9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Hmgcs1Q8JZK9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Hmgcs1Q8JZK9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.88■■□□□ 1.25
Hmgcs1Q8JZK9 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.88■■□□□ 1.25
Hmgcs1Q8JZK9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Hmgcs1Q8JZK9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Hmgcs1Q8JZK9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Hmgcs1Q8JZK9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Hmgcs1Q8JZK9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hmgcs1Q8JZK9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Hmgcs1Q8JZK9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Hmgcs1Q8JZK9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Hmgcs1Q8JZK9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Hmgcs1Q8JZK9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.83■■□□□ 1.25
Hmgcs1Q8JZK9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Hmgcs1Q8JZK9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.82■■□□□ 1.24
Hmgcs1Q8JZK9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Hmgcs1Q8JZK9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Hmgcs1Q8JZK9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Hmgcs1Q8JZK9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
Hmgcs1Q8JZK9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
Hmgcs1Q8JZK9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Hmgcs1Q8JZK9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Hmgcs1Q8JZK9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Hmgcs1Q8JZK9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.8■■□□□ 1.24
Hmgcs1Q8JZK9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Hmgcs1Q8JZK9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hmgcs1Q8JZK9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Hmgcs1Q8JZK9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.79■■□□□ 1.24
Hmgcs1Q8JZK9 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.79■■□□□ 1.24
Hmgcs1Q8JZK9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hmgcs1Q8JZK9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.78■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms