Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Hmgcs1Q8JZK9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Hmgcs1Q8JZK9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Hmgcs1Q8JZK9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.17■■□□□ 1.3
Hmgcs1Q8JZK9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Hmgcs1Q8JZK9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.15■■□□□ 1.3
Hmgcs1Q8JZK9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hmgcs1Q8JZK9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Hmgcs1Q8JZK9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Hmgcs1Q8JZK9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
Hmgcs1Q8JZK9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Hmgcs1Q8JZK9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Hmgcs1Q8JZK9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Hmgcs1Q8JZK9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Hmgcs1Q8JZK9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hmgcs1Q8JZK9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Hmgcs1Q8JZK9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hmgcs1Q8JZK9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Hmgcs1Q8JZK9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hmgcs1Q8JZK9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.1■■□□□ 1.29
Hmgcs1Q8JZK9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hmgcs1Q8JZK9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hmgcs1Q8JZK9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hmgcs1Q8JZK9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hmgcs1Q8JZK9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs1Q8JZK9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs1Q8JZK9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs1Q8JZK9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs1Q8JZK9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hmgcs1Q8JZK9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Hmgcs1Q8JZK9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Hmgcs1Q8JZK9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Hmgcs1Q8JZK9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Hmgcs1Q8JZK9 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.07■■□□□ 1.28
Hmgcs1Q8JZK9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hmgcs1Q8JZK9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hmgcs1Q8JZK9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hmgcs1Q8JZK9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hmgcs1Q8JZK9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hmgcs1Q8JZK9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Hmgcs1Q8JZK9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hmgcs1Q8JZK9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hmgcs1Q8JZK9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hmgcs1Q8JZK9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Hmgcs1Q8JZK9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Hmgcs1Q8JZK9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Hmgcs1Q8JZK9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23■■□□□ 1.27
Hmgcs1Q8JZK9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hmgcs1Q8JZK9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hmgcs1Q8JZK9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hmgcs1Q8JZK9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.97■■□□□ 1.27
Hmgcs1Q8JZK9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.96■■□□□ 1.27
Hmgcs1Q8JZK9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.96■■□□□ 1.27
Hmgcs1Q8JZK9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.95■■□□□ 1.27
Hmgcs1Q8JZK9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Hmgcs1Q8JZK9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Hmgcs1Q8JZK9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Hmgcs1Q8JZK9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.94■■□□□ 1.26
Hmgcs1Q8JZK9 Zfp131-205ENSMUST00000223812 663 ntBASIC22.94■■□□□ 1.26
Hmgcs1Q8JZK9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.93■■□□□ 1.26
Hmgcs1Q8JZK9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.92■■□□□ 1.26
Hmgcs1Q8JZK9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hmgcs1Q8JZK9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hmgcs1Q8JZK9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hmgcs1Q8JZK9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Hmgcs1Q8JZK9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Hmgcs1Q8JZK9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
Hmgcs1Q8JZK9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.89■■□□□ 1.25
Hmgcs1Q8JZK9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Hmgcs1Q8JZK9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Hmgcs1Q8JZK9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.88■■□□□ 1.25
Hmgcs1Q8JZK9 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.88■■□□□ 1.25
Hmgcs1Q8JZK9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Hmgcs1Q8JZK9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Hmgcs1Q8JZK9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Hmgcs1Q8JZK9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Hmgcs1Q8JZK9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hmgcs1Q8JZK9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Hmgcs1Q8JZK9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Hmgcs1Q8JZK9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Hmgcs1Q8JZK9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Hmgcs1Q8JZK9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.83■■□□□ 1.25
Hmgcs1Q8JZK9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Hmgcs1Q8JZK9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.82■■□□□ 1.24
Hmgcs1Q8JZK9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Hmgcs1Q8JZK9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Hmgcs1Q8JZK9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Hmgcs1Q8JZK9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
Hmgcs1Q8JZK9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
Hmgcs1Q8JZK9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Hmgcs1Q8JZK9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Hmgcs1Q8JZK9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Hmgcs1Q8JZK9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.8■■□□□ 1.24
Hmgcs1Q8JZK9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Hmgcs1Q8JZK9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hmgcs1Q8JZK9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Hmgcs1Q8JZK9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.79■■□□□ 1.24
Hmgcs1Q8JZK9 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.79■■□□□ 1.24
Hmgcs1Q8JZK9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hmgcs1Q8JZK9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.78■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms