Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smco3Q8BQM7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smco3Q8BQM7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smco3Q8BQM7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smco3Q8BQM7 Gm25262-201ENSMUST00000174934 133 ntBASIC19.83■□□□□ 0.77
Smco3Q8BQM7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smco3Q8BQM7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smco3Q8BQM7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Smco3Q8BQM7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smco3Q8BQM7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smco3Q8BQM7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smco3Q8BQM7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smco3Q8BQM7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smco3Q8BQM7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
Smco3Q8BQM7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.79■□□□□ 0.76
Smco3Q8BQM7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Smco3Q8BQM7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smco3Q8BQM7 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.78■□□□□ 0.76
Smco3Q8BQM7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smco3Q8BQM7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Smco3Q8BQM7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smco3Q8BQM7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smco3Q8BQM7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smco3Q8BQM7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smco3Q8BQM7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco3Q8BQM7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco3Q8BQM7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco3Q8BQM7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smco3Q8BQM7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smco3Q8BQM7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smco3Q8BQM7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smco3Q8BQM7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smco3Q8BQM7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smco3Q8BQM7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco3Q8BQM7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smco3Q8BQM7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smco3Q8BQM7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smco3Q8BQM7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.72■□□□□ 0.75
Smco3Q8BQM7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smco3Q8BQM7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Smco3Q8BQM7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Smco3Q8BQM7 Gm27322-201ENSMUST00000184007 104 ntBASIC19.71■□□□□ 0.75
Smco3Q8BQM7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Smco3Q8BQM7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smco3Q8BQM7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smco3Q8BQM7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smco3Q8BQM7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smco3Q8BQM7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smco3Q8BQM7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smco3Q8BQM7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smco3Q8BQM7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Smco3Q8BQM7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smco3Q8BQM7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smco3Q8BQM7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smco3Q8BQM7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Smco3Q8BQM7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smco3Q8BQM7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smco3Q8BQM7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Smco3Q8BQM7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smco3Q8BQM7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.65■□□□□ 0.74
Smco3Q8BQM7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Smco3Q8BQM7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smco3Q8BQM7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smco3Q8BQM7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.64■□□□□ 0.73
Smco3Q8BQM7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Smco3Q8BQM7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.64■□□□□ 0.73
Smco3Q8BQM7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smco3Q8BQM7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smco3Q8BQM7 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.62■□□□□ 0.73
Smco3Q8BQM7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.62■□□□□ 0.73
Smco3Q8BQM7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smco3Q8BQM7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Smco3Q8BQM7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smco3Q8BQM7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smco3Q8BQM7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smco3Q8BQM7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smco3Q8BQM7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smco3Q8BQM7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Smco3Q8BQM7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Smco3Q8BQM7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Smco3Q8BQM7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smco3Q8BQM7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smco3Q8BQM7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smco3Q8BQM7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smco3Q8BQM7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smco3Q8BQM7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smco3Q8BQM7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smco3Q8BQM7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smco3Q8BQM7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Smco3Q8BQM7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Smco3Q8BQM7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smco3Q8BQM7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.55■□□□□ 0.72
Smco3Q8BQM7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smco3Q8BQM7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smco3Q8BQM7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Smco3Q8BQM7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Smco3Q8BQM7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smco3Q8BQM7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Smco3Q8BQM7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Smco3Q8BQM7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms