Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Samm50Q8BGH2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.32■■■□□ 2.12
Samm50Q8BGH2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Samm50Q8BGH2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Samm50Q8BGH2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Samm50Q8BGH2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Samm50Q8BGH2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Samm50Q8BGH2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
Samm50Q8BGH2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.27■■■□□ 2.12
Samm50Q8BGH2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC28.27■■■□□ 2.12
Samm50Q8BGH2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Samm50Q8BGH2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28.26■■■□□ 2.11
Samm50Q8BGH2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Samm50Q8BGH2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Samm50Q8BGH2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.25■■■□□ 2.11
Samm50Q8BGH2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Samm50Q8BGH2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Samm50Q8BGH2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.24■■■□□ 2.11
Samm50Q8BGH2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
Samm50Q8BGH2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Samm50Q8BGH2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Samm50Q8BGH2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Samm50Q8BGH2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Samm50Q8BGH2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Samm50Q8BGH2 Gm24970-201ENSMUST00000175582 82 ntBASIC28.23■■■□□ 2.11
Samm50Q8BGH2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.23■■■□□ 2.11
Samm50Q8BGH2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Samm50Q8BGH2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Samm50Q8BGH2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Samm50Q8BGH2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Samm50Q8BGH2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Samm50Q8BGH2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Samm50Q8BGH2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Samm50Q8BGH2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Samm50Q8BGH2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.18■■■□□ 2.1
Samm50Q8BGH2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.18■■■□□ 2.1
Samm50Q8BGH2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Samm50Q8BGH2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Samm50Q8BGH2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Samm50Q8BGH2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Samm50Q8BGH2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.16■■■□□ 2.1
Samm50Q8BGH2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Samm50Q8BGH2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Samm50Q8BGH2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
Samm50Q8BGH2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Samm50Q8BGH2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Samm50Q8BGH2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Samm50Q8BGH2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Samm50Q8BGH2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Samm50Q8BGH2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Samm50Q8BGH2 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.14■■■□□ 2.1
Samm50Q8BGH2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Samm50Q8BGH2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Samm50Q8BGH2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Samm50Q8BGH2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.13■■■□□ 2.09
Samm50Q8BGH2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Samm50Q8BGH2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Samm50Q8BGH2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC28.11■■■□□ 2.09
Samm50Q8BGH2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Samm50Q8BGH2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Samm50Q8BGH2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Samm50Q8BGH2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Samm50Q8BGH2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Samm50Q8BGH2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Samm50Q8BGH2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
Samm50Q8BGH2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Samm50Q8BGH2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Samm50Q8BGH2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Samm50Q8BGH2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Samm50Q8BGH2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.05■■■□□ 2.08
Samm50Q8BGH2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
Samm50Q8BGH2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.03■■■□□ 2.08
Samm50Q8BGH2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Samm50Q8BGH2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Samm50Q8BGH2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.02■■■□□ 2.08
Samm50Q8BGH2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
Samm50Q8BGH2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Samm50Q8BGH2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Samm50Q8BGH2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28■■■□□ 2.07
Samm50Q8BGH2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.99■■■□□ 2.07
Samm50Q8BGH2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Samm50Q8BGH2 AC157572.2-201ENSMUST00000226970 908 ntBASIC27.98■■■□□ 2.07
Samm50Q8BGH2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Samm50Q8BGH2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Samm50Q8BGH2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Samm50Q8BGH2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Samm50Q8BGH2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Samm50Q8BGH2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Samm50Q8BGH2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Samm50Q8BGH2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Samm50Q8BGH2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Samm50Q8BGH2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Samm50Q8BGH2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
Samm50Q8BGH2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Samm50Q8BGH2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Samm50Q8BGH2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Samm50Q8BGH2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.93■■■□□ 2.06
Samm50Q8BGH2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Samm50Q8BGH2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
Samm50Q8BGH2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms