Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Trnp1Q80ZI1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Trnp1Q80ZI1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.58■■■□□ 2.17
Trnp1Q80ZI1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
Trnp1Q80ZI1 Cap2-205ENSMUST00000225824 1634 ntBASIC28.57■■■□□ 2.16
Trnp1Q80ZI1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.57■■■□□ 2.16
Trnp1Q80ZI1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
Trnp1Q80ZI1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Trnp1Q80ZI1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Trnp1Q80ZI1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.54■■■□□ 2.16
Trnp1Q80ZI1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Trnp1Q80ZI1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Trnp1Q80ZI1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.5■■■□□ 2.15
Trnp1Q80ZI1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Trnp1Q80ZI1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Trnp1Q80ZI1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.45■■■□□ 2.14
Trnp1Q80ZI1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Trnp1Q80ZI1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Trnp1Q80ZI1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Trnp1Q80ZI1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.43■■■□□ 2.14
Trnp1Q80ZI1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Trnp1Q80ZI1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Trnp1Q80ZI1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Trnp1Q80ZI1 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.4■■■□□ 2.14
Trnp1Q80ZI1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Trnp1Q80ZI1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Trnp1Q80ZI1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.39■■■□□ 2.14
Trnp1Q80ZI1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Trnp1Q80ZI1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Trnp1Q80ZI1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Trnp1Q80ZI1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Trnp1Q80ZI1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Trnp1Q80ZI1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
Trnp1Q80ZI1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Trnp1Q80ZI1 Gm6311-201ENSMUST00000073790 878 ntBASIC28.33■■■□□ 2.13
Trnp1Q80ZI1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trnp1Q80ZI1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Trnp1Q80ZI1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Trnp1Q80ZI1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.31■■■□□ 2.12
Trnp1Q80ZI1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Trnp1Q80ZI1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.3■■■□□ 2.12
Trnp1Q80ZI1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Trnp1Q80ZI1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Trnp1Q80ZI1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Trnp1Q80ZI1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.28■■■□□ 2.12
Trnp1Q80ZI1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.28■■■□□ 2.12
Trnp1Q80ZI1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Trnp1Q80ZI1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Trnp1Q80ZI1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Trnp1Q80ZI1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Trnp1Q80ZI1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.26■■■□□ 2.11
Trnp1Q80ZI1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.25■■■□□ 2.11
Trnp1Q80ZI1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Trnp1Q80ZI1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Trnp1Q80ZI1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Trnp1Q80ZI1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Trnp1Q80ZI1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.23■■■□□ 2.11
Trnp1Q80ZI1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trnp1Q80ZI1 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.22■■■□□ 2.11
Trnp1Q80ZI1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Trnp1Q80ZI1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Trnp1Q80ZI1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Trnp1Q80ZI1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
Trnp1Q80ZI1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Trnp1Q80ZI1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Trnp1Q80ZI1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Trnp1Q80ZI1 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.18■■■□□ 2.1
Trnp1Q80ZI1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Trnp1Q80ZI1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Trnp1Q80ZI1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Trnp1Q80ZI1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Trnp1Q80ZI1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.14■■■□□ 2.1
Trnp1Q80ZI1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.14■■■□□ 2.1
Trnp1Q80ZI1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
Trnp1Q80ZI1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.14■■■□□ 2.1
Trnp1Q80ZI1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Trnp1Q80ZI1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.12■■■□□ 2.09
Trnp1Q80ZI1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Trnp1Q80ZI1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Trnp1Q80ZI1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trnp1Q80ZI1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trnp1Q80ZI1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Trnp1Q80ZI1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Trnp1Q80ZI1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Trnp1Q80ZI1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.1■■■□□ 2.09
Trnp1Q80ZI1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trnp1Q80ZI1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trnp1Q80ZI1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trnp1Q80ZI1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.08■■■□□ 2.09
Trnp1Q80ZI1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trnp1Q80ZI1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Trnp1Q80ZI1 Particl-201ENSMUST00000205370 1560 ntBASIC28.07■■■□□ 2.08
Trnp1Q80ZI1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Trnp1Q80ZI1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
Trnp1Q80ZI1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Trnp1Q80ZI1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Trnp1Q80ZI1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Trnp1Q80ZI1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Trnp1Q80ZI1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Trnp1Q80ZI1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms