Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim36Q80WG7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.16■■□□□ 1.3
Trim36Q80WG7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Trim36Q80WG7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.15■■□□□ 1.3
Trim36Q80WG7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.15■■□□□ 1.3
Trim36Q80WG7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Trim36Q80WG7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim36Q80WG7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim36Q80WG7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.14■■□□□ 1.29
Trim36Q80WG7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim36Q80WG7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim36Q80WG7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.13■■□□□ 1.29
Trim36Q80WG7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim36Q80WG7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Trim36Q80WG7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim36Q80WG7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.11■■□□□ 1.29
Trim36Q80WG7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Trim36Q80WG7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Trim36Q80WG7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Trim36Q80WG7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Trim36Q80WG7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim36Q80WG7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim36Q80WG7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Trim36Q80WG7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim36Q80WG7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trim36Q80WG7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim36Q80WG7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.06■■□□□ 1.28
Trim36Q80WG7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim36Q80WG7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim36Q80WG7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
Trim36Q80WG7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Trim36Q80WG7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim36Q80WG7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.04■■□□□ 1.28
Trim36Q80WG7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Trim36Q80WG7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim36Q80WG7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim36Q80WG7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim36Q80WG7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim36Q80WG7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim36Q80WG7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
Trim36Q80WG7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Trim36Q80WG7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim36Q80WG7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.01■■□□□ 1.27
Trim36Q80WG7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
Trim36Q80WG7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Trim36Q80WG7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23■■□□□ 1.27
Trim36Q80WG7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim36Q80WG7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trim36Q80WG7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim36Q80WG7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Trim36Q80WG7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
Trim36Q80WG7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim36Q80WG7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.98■■□□□ 1.27
Trim36Q80WG7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim36Q80WG7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim36Q80WG7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim36Q80WG7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim36Q80WG7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.97■■□□□ 1.27
Trim36Q80WG7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trim36Q80WG7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
Trim36Q80WG7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim36Q80WG7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trim36Q80WG7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.96■■□□□ 1.27
Trim36Q80WG7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim36Q80WG7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trim36Q80WG7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.95■■□□□ 1.26
Trim36Q80WG7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim36Q80WG7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim36Q80WG7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim36Q80WG7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim36Q80WG7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim36Q80WG7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim36Q80WG7 Gm24970-201ENSMUST00000175582 82 ntBASIC22.93■■□□□ 1.26
Trim36Q80WG7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim36Q80WG7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim36Q80WG7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trim36Q80WG7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.92■■□□□ 1.26
Trim36Q80WG7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.92■■□□□ 1.26
Trim36Q80WG7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trim36Q80WG7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Trim36Q80WG7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim36Q80WG7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim36Q80WG7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
Trim36Q80WG7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim36Q80WG7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim36Q80WG7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Trim36Q80WG7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
Trim36Q80WG7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim36Q80WG7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Trim36Q80WG7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.25
Trim36Q80WG7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trim36Q80WG7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trim36Q80WG7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trim36Q80WG7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Trim36Q80WG7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trim36Q80WG7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Trim36Q80WG7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trim36Q80WG7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Trim36Q80WG7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.85■■□□□ 1.25
Trim36Q80WG7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms