Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rif1Q6PR54 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rif1Q6PR54 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rif1Q6PR54 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rif1Q6PR54 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.3■■□□□ 1
Rif1Q6PR54 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rif1Q6PR54 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rif1Q6PR54 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.28■■□□□ 1
Rif1Q6PR54 Gm7332-201ENSMUST00000118351 454 ntBASIC21.28■■□□□ 1
Rif1Q6PR54 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.28■■□□□ 1
Rif1Q6PR54 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.28■■□□□ 1
Rif1Q6PR54 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rif1Q6PR54 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rif1Q6PR54 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rif1Q6PR54 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.26■□□□□ 0.99
Rif1Q6PR54 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.25■□□□□ 0.99
Rif1Q6PR54 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.24■□□□□ 0.99
Rif1Q6PR54 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.24■□□□□ 0.99
Rif1Q6PR54 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rif1Q6PR54 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rif1Q6PR54 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rif1Q6PR54 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rif1Q6PR54 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.23■□□□□ 0.99
Rif1Q6PR54 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rif1Q6PR54 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.23■□□□□ 0.99
Rif1Q6PR54 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Rif1Q6PR54 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.22■□□□□ 0.99
Rif1Q6PR54 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.22■□□□□ 0.99
Rif1Q6PR54 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.2■□□□□ 0.99
Rif1Q6PR54 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.2■□□□□ 0.99
Rif1Q6PR54 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rif1Q6PR54 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.2■□□□□ 0.98
Rif1Q6PR54 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.19■□□□□ 0.98
Rif1Q6PR54 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.18■□□□□ 0.98
Rif1Q6PR54 Serp2-204ENSMUST00000228055 705 ntBASIC21.18■□□□□ 0.98
Rif1Q6PR54 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rif1Q6PR54 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.18■□□□□ 0.98
Rif1Q6PR54 Gm4799-201ENSMUST00000095396 657 ntBASIC21.18■□□□□ 0.98
Rif1Q6PR54 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rif1Q6PR54 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.16■□□□□ 0.98
Rif1Q6PR54 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rif1Q6PR54 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rif1Q6PR54 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.14■□□□□ 0.97
Rif1Q6PR54 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rif1Q6PR54 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rif1Q6PR54 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.13■□□□□ 0.97
Rif1Q6PR54 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Rif1Q6PR54 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rif1Q6PR54 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.12■□□□□ 0.97
Rif1Q6PR54 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rif1Q6PR54 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.11■□□□□ 0.97
Rif1Q6PR54 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rif1Q6PR54 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rif1Q6PR54 Gm11687-201ENSMUST00000118911 886 ntBASIC21.09■□□□□ 0.97
Rif1Q6PR54 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.09■□□□□ 0.97
Rif1Q6PR54 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rif1Q6PR54 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rif1Q6PR54 Scarna2-201ENSMUST00000157560 414 ntBASIC21.08■□□□□ 0.97
Rif1Q6PR54 Gm5921-201ENSMUST00000075898 882 ntBASIC21.08■□□□□ 0.96
Rif1Q6PR54 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rif1Q6PR54 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.07■□□□□ 0.96
Rif1Q6PR54 Gm16437-201ENSMUST00000025669 507 ntBASIC21.07■□□□□ 0.96
Rif1Q6PR54 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rif1Q6PR54 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rif1Q6PR54 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rif1Q6PR54 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rif1Q6PR54 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.07■□□□□ 0.96
Rif1Q6PR54 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Rif1Q6PR54 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Rif1Q6PR54 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Rif1Q6PR54 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rif1Q6PR54 Gm15820-201ENSMUST00000201566 728 ntBASIC21.05■□□□□ 0.96
Rif1Q6PR54 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.05■□□□□ 0.96
Rif1Q6PR54 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rif1Q6PR54 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Rif1Q6PR54 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Rif1Q6PR54 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.03■□□□□ 0.96
Rif1Q6PR54 Gm9806-201ENSMUST00000051080 552 ntBASIC21.03■□□□□ 0.96
Rif1Q6PR54 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.03■□□□□ 0.96
Rif1Q6PR54 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.02■□□□□ 0.96
Rif1Q6PR54 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rif1Q6PR54 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rif1Q6PR54 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rif1Q6PR54 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rif1Q6PR54 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rif1Q6PR54 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.01■□□□□ 0.95
Rif1Q6PR54 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rif1Q6PR54 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rif1Q6PR54 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rif1Q6PR54 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rif1Q6PR54 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rif1Q6PR54 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rif1Q6PR54 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rif1Q6PR54 Rps24-207ENSMUST00000224568 714 ntBASIC20.98■□□□□ 0.95
Rif1Q6PR54 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rif1Q6PR54 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rif1Q6PR54 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rif1Q6PR54 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rif1Q6PR54 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.96■□□□□ 0.95
Rif1Q6PR54 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms