Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Srsf1Q6PDM2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Srsf1Q6PDM2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.64■■□□□ 1.05
Srsf1Q6PDM2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.64■■□□□ 1.05
Srsf1Q6PDM2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Srsf1Q6PDM2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Srsf1Q6PDM2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Srsf1Q6PDM2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Srsf1Q6PDM2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Srsf1Q6PDM2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Srsf1Q6PDM2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Srsf1Q6PDM2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Srsf1Q6PDM2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.61■■□□□ 1.05
Srsf1Q6PDM2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.61■■□□□ 1.05
Srsf1Q6PDM2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Srsf1Q6PDM2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Srsf1Q6PDM2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.6■■□□□ 1.05
Srsf1Q6PDM2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Srsf1Q6PDM2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Srsf1Q6PDM2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Srsf1Q6PDM2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.59■■□□□ 1.05
Srsf1Q6PDM2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srsf1Q6PDM2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srsf1Q6PDM2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srsf1Q6PDM2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.58■■□□□ 1.05
Srsf1Q6PDM2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Srsf1Q6PDM2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Srsf1Q6PDM2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.58■■□□□ 1.05
Srsf1Q6PDM2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Srsf1Q6PDM2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.56■■□□□ 1.04
Srsf1Q6PDM2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Srsf1Q6PDM2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Srsf1Q6PDM2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Srsf1Q6PDM2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Srsf1Q6PDM2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Srsf1Q6PDM2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Srsf1Q6PDM2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Srsf1Q6PDM2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.52■■□□□ 1.04
Srsf1Q6PDM2 Gm12366-201ENSMUST00000121722 873 ntBASIC21.52■■□□□ 1.04
Srsf1Q6PDM2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.52■■□□□ 1.04
Srsf1Q6PDM2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.52■■□□□ 1.04
Srsf1Q6PDM2 Gm5786-201ENSMUST00000085368 882 ntBASIC21.52■■□□□ 1.04
Srsf1Q6PDM2 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.52■■□□□ 1.04
Srsf1Q6PDM2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.51■■□□□ 1.03
Srsf1Q6PDM2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Srsf1Q6PDM2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.5■■□□□ 1.03
Srsf1Q6PDM2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Srsf1Q6PDM2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Srsf1Q6PDM2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Srsf1Q6PDM2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Srsf1Q6PDM2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Srsf1Q6PDM2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.48■■□□□ 1.03
Srsf1Q6PDM2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Srsf1Q6PDM2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Srsf1Q6PDM2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Srsf1Q6PDM2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Srsf1Q6PDM2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Srsf1Q6PDM2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Srsf1Q6PDM2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Srsf1Q6PDM2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Srsf1Q6PDM2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.44■■□□□ 1.02
Srsf1Q6PDM2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.44■■□□□ 1.02
Srsf1Q6PDM2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Srsf1Q6PDM2 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.44■■□□□ 1.02
Srsf1Q6PDM2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Srsf1Q6PDM2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Srsf1Q6PDM2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Srsf1Q6PDM2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Srsf1Q6PDM2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Srsf1Q6PDM2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Srsf1Q6PDM2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Srsf1Q6PDM2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.38■■□□□ 1.01
Srsf1Q6PDM2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Srsf1Q6PDM2 Scarna2-201ENSMUST00000157560 414 ntBASIC21.37■■□□□ 1.01
Srsf1Q6PDM2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Srsf1Q6PDM2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Srsf1Q6PDM2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Srsf1Q6PDM2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
Srsf1Q6PDM2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.36■■□□□ 1.01
Srsf1Q6PDM2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Srsf1Q6PDM2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Srsf1Q6PDM2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.36■■□□□ 1.01
Srsf1Q6PDM2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Srsf1Q6PDM2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.34■■□□□ 1.01
Srsf1Q6PDM2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.33■■□□□ 1.01
Srsf1Q6PDM2 Gm4799-201ENSMUST00000095396 657 ntBASIC21.33■■□□□ 1.01
Srsf1Q6PDM2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.32■■□□□ 1
Srsf1Q6PDM2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.32■■□□□ 1
Srsf1Q6PDM2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.31■■□□□ 1
Srsf1Q6PDM2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Srsf1Q6PDM2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.31■■□□□ 1
Srsf1Q6PDM2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.3■■□□□ 1
Srsf1Q6PDM2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Srsf1Q6PDM2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Srsf1Q6PDM2 Gm5812-201ENSMUST00000061073 957 ntBASIC21.29■■□□□ 1
Srsf1Q6PDM2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Srsf1Q6PDM2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Srsf1Q6PDM2 Gm11687-201ENSMUST00000118911 886 ntBASIC21.28■■□□□ 1
Srsf1Q6PDM2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Srsf1Q6PDM2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms