Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tgfbr1Q64729 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tgfbr1Q64729 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tgfbr1Q64729 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tgfbr1Q64729 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tgfbr1Q64729 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tgfbr1Q64729 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Tgfbr1Q64729 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tgfbr1Q64729 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tgfbr1Q64729 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tgfbr1Q64729 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tgfbr1Q64729 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Tgfbr1Q64729 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tgfbr1Q64729 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tgfbr1Q64729 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tgfbr1Q64729 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tgfbr1Q64729 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tgfbr1Q64729 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tgfbr1Q64729 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.56■□□□□ 0.72
Tgfbr1Q64729 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Tgfbr1Q64729 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tgfbr1Q64729 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tgfbr1Q64729 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Tgfbr1Q64729 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tgfbr1Q64729 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tgfbr1Q64729 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tgfbr1Q64729 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tgfbr1Q64729 Gm24804-201ENSMUST00000174982 85 ntBASIC19.53■□□□□ 0.72
Tgfbr1Q64729 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tgfbr1Q64729 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Tgfbr1Q64729 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Tgfbr1Q64729 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tgfbr1Q64729 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tgfbr1Q64729 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tgfbr1Q64729 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tgfbr1Q64729 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Tgfbr1Q64729 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Tgfbr1Q64729 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tgfbr1Q64729 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tgfbr1Q64729 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.49■□□□□ 0.71
Tgfbr1Q64729 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tgfbr1Q64729 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tgfbr1Q64729 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Tgfbr1Q64729 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tgfbr1Q64729 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tgfbr1Q64729 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tgfbr1Q64729 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Tgfbr1Q64729 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tgfbr1Q64729 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Tgfbr1Q64729 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tgfbr1Q64729 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tgfbr1Q64729 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tgfbr1Q64729 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tgfbr1Q64729 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tgfbr1Q64729 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tgfbr1Q64729 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tgfbr1Q64729 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tgfbr1Q64729 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tgfbr1Q64729 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tgfbr1Q64729 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tgfbr1Q64729 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tgfbr1Q64729 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfbr1Q64729 Gm16148-201ENSMUST00000119653 893 ntBASIC19.44■□□□□ 0.7
Tgfbr1Q64729 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfbr1Q64729 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfbr1Q64729 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfbr1Q64729 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfbr1Q64729 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfbr1Q64729 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tgfbr1Q64729 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tgfbr1Q64729 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tgfbr1Q64729 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.41■□□□□ 0.7
Tgfbr1Q64729 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.41■□□□□ 0.7
Tgfbr1Q64729 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Tgfbr1Q64729 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Tgfbr1Q64729 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfbr1Q64729 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfbr1Q64729 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfbr1Q64729 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfbr1Q64729 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tgfbr1Q64729 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tgfbr1Q64729 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tgfbr1Q64729 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfbr1Q64729 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfbr1Q64729 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfbr1Q64729 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfbr1Q64729 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tgfbr1Q64729 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tgfbr1Q64729 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr1Q64729 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr1Q64729 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr1Q64729 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.37■□□□□ 0.69
Tgfbr1Q64729 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr1Q64729 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr1Q64729 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Tgfbr1Q64729 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfbr1Q64729 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Tgfbr1Q64729 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfbr1Q64729 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfbr1Q64729 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms