Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Ptp4a1Q63739 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Ptp4a1Q63739 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Ptp4a1Q63739 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ptp4a1Q63739 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.86■■□□□ 1.09
Ptp4a1Q63739 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptp4a1Q63739 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptp4a1Q63739 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptp4a1Q63739 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ptp4a1Q63739 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ptp4a1Q63739 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptp4a1Q63739 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.83■■□□□ 1.08
Ptp4a1Q63739 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptp4a1Q63739 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.81■■□□□ 1.08
Ptp4a1Q63739 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ptp4a1Q63739 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ptp4a1Q63739 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ptp4a1Q63739 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ptp4a1Q63739 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ptp4a1Q63739 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.78■■□□□ 1.08
Ptp4a1Q63739 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptp4a1Q63739 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptp4a1Q63739 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptp4a1Q63739 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptp4a1Q63739 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptp4a1Q63739 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptp4a1Q63739 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ptp4a1Q63739 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ptp4a1Q63739 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptp4a1Q63739 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptp4a1Q63739 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.75■■□□□ 1.07
Ptp4a1Q63739 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ptp4a1Q63739 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptp4a1Q63739 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ptp4a1Q63739 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ptp4a1Q63739 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
Ptp4a1Q63739 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptp4a1Q63739 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptp4a1Q63739 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.72■■□□□ 1.07
Ptp4a1Q63739 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptp4a1Q63739 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ptp4a1Q63739 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptp4a1Q63739 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ptp4a1Q63739 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptp4a1Q63739 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ptp4a1Q63739 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptp4a1Q63739 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ptp4a1Q63739 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptp4a1Q63739 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptp4a1Q63739 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptp4a1Q63739 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptp4a1Q63739 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ptp4a1Q63739 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ptp4a1Q63739 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptp4a1Q63739 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.66■■□□□ 1.06
Ptp4a1Q63739 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptp4a1Q63739 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ptp4a1Q63739 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Ptp4a1Q63739 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ptp4a1Q63739 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ptp4a1Q63739 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ptp4a1Q63739 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptp4a1Q63739 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ptp4a1Q63739 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ptp4a1Q63739 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ptp4a1Q63739 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
Ptp4a1Q63739 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptp4a1Q63739 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptp4a1Q63739 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ptp4a1Q63739 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.61■■□□□ 1.05
Ptp4a1Q63739 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptp4a1Q63739 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
Ptp4a1Q63739 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ptp4a1Q63739 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.61■■□□□ 1.05
Ptp4a1Q63739 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.61■■□□□ 1.05
Ptp4a1Q63739 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptp4a1Q63739 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptp4a1Q63739 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptp4a1Q63739 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptp4a1Q63739 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.59■■□□□ 1.05
Ptp4a1Q63739 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ptp4a1Q63739 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ptp4a1Q63739 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptp4a1Q63739 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.58■■□□□ 1.05
Ptp4a1Q63739 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ptp4a1Q63739 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptp4a1Q63739 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptp4a1Q63739 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptp4a1Q63739 Zfp131-205ENSMUST00000223812 663 ntBASIC21.56■■□□□ 1.04
Ptp4a1Q63739 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ptp4a1Q63739 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptp4a1Q63739 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ptp4a1Q63739 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ptp4a1Q63739 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ptp4a1Q63739 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ptp4a1Q63739 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptp4a1Q63739 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ptp4a1Q63739 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ptp4a1Q63739 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ptp4a1Q63739 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms