Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ss18Q62280 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ss18Q62280 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Ss18Q62280 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ss18Q62280 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ss18Q62280 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.74■□□□□ 0.43
Ss18Q62280 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ss18Q62280 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ss18Q62280 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.72■□□□□ 0.43
Ss18Q62280 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ss18Q62280 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ss18Q62280 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ss18Q62280 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ss18Q62280 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Ss18Q62280 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ss18Q62280 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ss18Q62280 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ss18Q62280 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ss18Q62280 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ss18Q62280 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ss18Q62280 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ss18Q62280 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ss18Q62280 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ss18Q62280 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ss18Q62280 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ss18Q62280 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ss18Q62280 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ss18Q62280 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ss18Q62280 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.67■□□□□ 0.42
Ss18Q62280 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.67■□□□□ 0.42
Ss18Q62280 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ss18Q62280 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ss18Q62280 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ss18Q62280 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ss18Q62280 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ss18Q62280 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.65■□□□□ 0.42
Ss18Q62280 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ss18Q62280 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ss18Q62280 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ss18Q62280 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ss18Q62280 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Ss18Q62280 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ss18Q62280 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.63■□□□□ 0.41
Ss18Q62280 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.63■□□□□ 0.41
Ss18Q62280 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ss18Q62280 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ss18Q62280 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ss18Q62280 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ss18Q62280 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ss18Q62280 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ss18Q62280 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ss18Q62280 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ss18Q62280 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ss18Q62280 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ss18Q62280 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ss18Q62280 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Ss18Q62280 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ss18Q62280 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ss18Q62280 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ss18Q62280 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ss18Q62280 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ss18Q62280 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.59■□□□□ 0.41
Ss18Q62280 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ss18Q62280 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ss18Q62280 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ss18Q62280 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ss18Q62280 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ss18Q62280 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ss18Q62280 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ss18Q62280 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ss18Q62280 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ss18Q62280 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ss18Q62280 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ss18Q62280 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ss18Q62280 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ss18Q62280 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.56■□□□□ 0.4
Ss18Q62280 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ss18Q62280 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ss18Q62280 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ss18Q62280 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ss18Q62280 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ss18Q62280 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ss18Q62280 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ss18Q62280 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ss18Q62280 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ss18Q62280 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ss18Q62280 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ss18Q62280 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ss18Q62280 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ss18Q62280 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.53■□□□□ 0.4
Ss18Q62280 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ss18Q62280 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ss18Q62280 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ss18Q62280 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ss18Q62280 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ss18Q62280 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ss18Q62280 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ss18Q62280 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ss18Q62280 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ss18Q62280 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 125 ms