Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.16■■□□□ 1.14
Clcn4Q61418 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Clcn4Q61418 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Clcn4Q61418 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Clcn4Q61418 Gm9397-201ENSMUST00000200125 605 ntBASIC22.14■■□□□ 1.13
Clcn4Q61418 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Clcn4Q61418 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Clcn4Q61418 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Clcn4Q61418 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Clcn4Q61418 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Clcn4Q61418 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Clcn4Q61418 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Clcn4Q61418 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Clcn4Q61418 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Clcn4Q61418 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Clcn4Q61418 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Clcn4Q61418 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Clcn4Q61418 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.08■■□□□ 1.13
Clcn4Q61418 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Clcn4Q61418 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Clcn4Q61418 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Clcn4Q61418 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Clcn4Q61418 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.07■■□□□ 1.12
Clcn4Q61418 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.07■■□□□ 1.12
Clcn4Q61418 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.07■■□□□ 1.12
Clcn4Q61418 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Clcn4Q61418 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Clcn4Q61418 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Clcn4Q61418 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.05■■□□□ 1.12
Clcn4Q61418 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.05■■□□□ 1.12
Clcn4Q61418 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Clcn4Q61418 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.04■■□□□ 1.12
Clcn4Q61418 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Clcn4Q61418 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Clcn4Q61418 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.02■■□□□ 1.12
Clcn4Q61418 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Clcn4Q61418 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Clcn4Q61418 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Clcn4Q61418 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Clcn4Q61418 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.11
Clcn4Q61418 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Clcn4Q61418 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Clcn4Q61418 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Clcn4Q61418 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Clcn4Q61418 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22■■□□□ 1.11
Clcn4Q61418 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Clcn4Q61418 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22■■□□□ 1.11
Clcn4Q61418 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22■■□□□ 1.11
Clcn4Q61418 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Clcn4Q61418 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Clcn4Q61418 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Clcn4Q61418 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Clcn4Q61418 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Clcn4Q61418 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Clcn4Q61418 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Clcn4Q61418 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
Clcn4Q61418 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Clcn4Q61418 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Clcn4Q61418 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Clcn4Q61418 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Clcn4Q61418 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Clcn4Q61418 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Clcn4Q61418 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.94■■□□□ 1.1
Clcn4Q61418 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Clcn4Q61418 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Clcn4Q61418 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Clcn4Q61418 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.93■■□□□ 1.1
Clcn4Q61418 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Clcn4Q61418 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Clcn4Q61418 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Clcn4Q61418 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Clcn4Q61418 Gm24970-201ENSMUST00000175582 82 ntBASIC21.91■■□□□ 1.1
Clcn4Q61418 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clcn4Q61418 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clcn4Q61418 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clcn4Q61418 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clcn4Q61418 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Clcn4Q61418 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Clcn4Q61418 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.87■■□□□ 1.09
Clcn4Q61418 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Clcn4Q61418 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clcn4Q61418 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.86■■□□□ 1.09
Clcn4Q61418 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.86■■□□□ 1.09
Clcn4Q61418 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Clcn4Q61418 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clcn4Q61418 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clcn4Q61418 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Clcn4Q61418 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Clcn4Q61418 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Clcn4Q61418 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clcn4Q61418 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Clcn4Q61418 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Clcn4Q61418 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Clcn4Q61418 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Clcn4Q61418 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Clcn4Q61418 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Clcn4Q61418 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.82■■□□□ 1.08
Clcn4Q61418 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Clcn4Q61418 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Clcn4Q61418 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms