Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Spg11Q3UHA3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Spg11Q3UHA3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Spg11Q3UHA3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
Spg11Q3UHA3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Spg11Q3UHA3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.66■■□□□ 1.38
Spg11Q3UHA3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.65■■□□□ 1.38
Spg11Q3UHA3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Spg11Q3UHA3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Spg11Q3UHA3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Spg11Q3UHA3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Spg11Q3UHA3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.64■■□□□ 1.38
Spg11Q3UHA3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Spg11Q3UHA3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Spg11Q3UHA3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Spg11Q3UHA3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.63■■□□□ 1.37
Spg11Q3UHA3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.63■■□□□ 1.37
Spg11Q3UHA3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.63■■□□□ 1.37
Spg11Q3UHA3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.62■■□□□ 1.37
Spg11Q3UHA3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Spg11Q3UHA3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Spg11Q3UHA3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.62■■□□□ 1.37
Spg11Q3UHA3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.62■■□□□ 1.37
Spg11Q3UHA3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Spg11Q3UHA3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Spg11Q3UHA3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Spg11Q3UHA3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.6■■□□□ 1.37
Spg11Q3UHA3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Spg11Q3UHA3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Spg11Q3UHA3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Spg11Q3UHA3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Spg11Q3UHA3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.56■■□□□ 1.36
Spg11Q3UHA3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Spg11Q3UHA3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.55■■□□□ 1.36
Spg11Q3UHA3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Spg11Q3UHA3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Spg11Q3UHA3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Spg11Q3UHA3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Spg11Q3UHA3 Gm4799-201ENSMUST00000095396 657 ntBASIC23.54■■□□□ 1.36
Spg11Q3UHA3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Spg11Q3UHA3 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.54■■□□□ 1.36
Spg11Q3UHA3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.53■■□□□ 1.36
Spg11Q3UHA3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Spg11Q3UHA3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Spg11Q3UHA3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Spg11Q3UHA3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Spg11Q3UHA3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Spg11Q3UHA3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Spg11Q3UHA3 Gm7332-201ENSMUST00000118351 454 ntBASIC23.49■■□□□ 1.35
Spg11Q3UHA3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.48■■□□□ 1.35
Spg11Q3UHA3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.48■■□□□ 1.35
Spg11Q3UHA3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Spg11Q3UHA3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Spg11Q3UHA3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Spg11Q3UHA3 Scarna2-201ENSMUST00000157560 414 ntBASIC23.47■■□□□ 1.35
Spg11Q3UHA3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Spg11Q3UHA3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Spg11Q3UHA3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Spg11Q3UHA3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.46■■□□□ 1.35
Spg11Q3UHA3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.44■■□□□ 1.34
Spg11Q3UHA3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Spg11Q3UHA3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.43■■□□□ 1.34
Spg11Q3UHA3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.43■■□□□ 1.34
Spg11Q3UHA3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Spg11Q3UHA3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Spg11Q3UHA3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
Spg11Q3UHA3 Gm11687-201ENSMUST00000118911 886 ntBASIC23.42■■□□□ 1.34
Spg11Q3UHA3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.42■■□□□ 1.34
Spg11Q3UHA3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Spg11Q3UHA3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Spg11Q3UHA3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.4■■□□□ 1.34
Spg11Q3UHA3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Spg11Q3UHA3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.38■■□□□ 1.33
Spg11Q3UHA3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Spg11Q3UHA3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Spg11Q3UHA3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.37■■□□□ 1.33
Spg11Q3UHA3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Spg11Q3UHA3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Spg11Q3UHA3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Spg11Q3UHA3 Gm9806-201ENSMUST00000051080 552 ntBASIC23.36■■□□□ 1.33
Spg11Q3UHA3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Spg11Q3UHA3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Spg11Q3UHA3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Spg11Q3UHA3 Gm16437-201ENSMUST00000025669 507 ntBASIC23.34■■□□□ 1.33
Spg11Q3UHA3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Spg11Q3UHA3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Spg11Q3UHA3 Gm15546-201ENSMUST00000122095 826 ntBASIC23.34■■□□□ 1.33
Spg11Q3UHA3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Spg11Q3UHA3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.33■■□□□ 1.33
Spg11Q3UHA3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Spg11Q3UHA3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Spg11Q3UHA3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Spg11Q3UHA3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Spg11Q3UHA3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Spg11Q3UHA3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.3■■□□□ 1.32
Spg11Q3UHA3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Spg11Q3UHA3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Spg11Q3UHA3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Spg11Q3UHA3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Spg11Q3UHA3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms