Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Smn1P97801 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smn1P97801 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smn1P97801 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smn1P97801 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Smn1P97801 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smn1P97801 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Smn1P97801 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smn1P97801 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smn1P97801 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
Smn1P97801 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Smn1P97801 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smn1P97801 Gm26115-201ENSMUST00000175605 87 ntBASIC20.67■□□□□ 0.9
Smn1P97801 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smn1P97801 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smn1P97801 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smn1P97801 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smn1P97801 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smn1P97801 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smn1P97801 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smn1P97801 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smn1P97801 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smn1P97801 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smn1P97801 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smn1P97801 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smn1P97801 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.61■□□□□ 0.89
Smn1P97801 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smn1P97801 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smn1P97801 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Smn1P97801 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smn1P97801 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smn1P97801 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smn1P97801 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smn1P97801 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Smn1P97801 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smn1P97801 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smn1P97801 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smn1P97801 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Smn1P97801 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.59■□□□□ 0.89
Smn1P97801 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smn1P97801 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Smn1P97801 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.57■□□□□ 0.88
Smn1P97801 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smn1P97801 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Smn1P97801 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.56■□□□□ 0.88
Smn1P97801 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Smn1P97801 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smn1P97801 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smn1P97801 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smn1P97801 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smn1P97801 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smn1P97801 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smn1P97801 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smn1P97801 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smn1P97801 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smn1P97801 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smn1P97801 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smn1P97801 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smn1P97801 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.52■□□□□ 0.88
Smn1P97801 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smn1P97801 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.52■□□□□ 0.88
Smn1P97801 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smn1P97801 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smn1P97801 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smn1P97801 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smn1P97801 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smn1P97801 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smn1P97801 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smn1P97801 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smn1P97801 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smn1P97801 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smn1P97801 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smn1P97801 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.48■□□□□ 0.87
Smn1P97801 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smn1P97801 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Smn1P97801 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smn1P97801 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Smn1P97801 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smn1P97801 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smn1P97801 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Smn1P97801 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smn1P97801 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smn1P97801 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Smn1P97801 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.44■□□□□ 0.86
Smn1P97801 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smn1P97801 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smn1P97801 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smn1P97801 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smn1P97801 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.42■□□□□ 0.86
Smn1P97801 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smn1P97801 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smn1P97801 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smn1P97801 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smn1P97801 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smn1P97801 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Smn1P97801 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smn1P97801 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smn1P97801 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smn1P97801 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smn1P97801 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms