Protein–RNA interactions for Protein: P62983

Rps27a, Ubiquitin-40S ribosomal protein S27a, mousemouse

Known RBP Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps27aP62983 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rps27aP62983 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rps27aP62983 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rps27aP62983 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rps27aP62983 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rps27aP62983 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rps27aP62983 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rps27aP62983 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rps27aP62983 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rps27aP62983 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rps27aP62983 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rps27aP62983 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rps27aP62983 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rps27aP62983 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rps27aP62983 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rps27aP62983 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rps27aP62983 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rps27aP62983 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rps27aP62983 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.87■□□□□ 0.93
Rps27aP62983 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rps27aP62983 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.86■□□□□ 0.93
Rps27aP62983 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rps27aP62983 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rps27aP62983 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rps27aP62983 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rps27aP62983 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rps27aP62983 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rps27aP62983 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rps27aP62983 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Rps27aP62983 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rps27aP62983 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rps27aP62983 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rps27aP62983 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rps27aP62983 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rps27aP62983 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rps27aP62983 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rps27aP62983 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rps27aP62983 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rps27aP62983 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rps27aP62983 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rps27aP62983 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rps27aP62983 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rps27aP62983 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rps27aP62983 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rps27aP62983 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rps27aP62983 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rps27aP62983 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.79■□□□□ 0.92
Rps27aP62983 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rps27aP62983 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rps27aP62983 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rps27aP62983 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rps27aP62983 Gm16148-201ENSMUST00000119653 893 ntBASIC20.77■□□□□ 0.92
Rps27aP62983 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rps27aP62983 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Rps27aP62983 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rps27aP62983 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rps27aP62983 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rps27aP62983 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rps27aP62983 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rps27aP62983 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Rps27aP62983 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rps27aP62983 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rps27aP62983 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rps27aP62983 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rps27aP62983 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rps27aP62983 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Rps27aP62983 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rps27aP62983 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rps27aP62983 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rps27aP62983 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rps27aP62983 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rps27aP62983 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rps27aP62983 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rps27aP62983 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rps27aP62983 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rps27aP62983 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rps27aP62983 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rps27aP62983 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rps27aP62983 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rps27aP62983 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.68■□□□□ 0.9
Rps27aP62983 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rps27aP62983 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rps27aP62983 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.67■□□□□ 0.9
Rps27aP62983 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rps27aP62983 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rps27aP62983 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rps27aP62983 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rps27aP62983 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rps27aP62983 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rps27aP62983 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rps27aP62983 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rps27aP62983 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rps27aP62983 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rps27aP62983 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rps27aP62983 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rps27aP62983 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Rps27aP62983 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rps27aP62983 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.62■□□□□ 0.89
Rps27aP62983 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rps27aP62983 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms