Protein–RNA interactions for Protein: P35279

Rab6a, Ras-related protein Rab-6A, mousemouse

Known RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab6aP35279 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab6aP35279 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab6aP35279 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rab6aP35279 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab6aP35279 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab6aP35279 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Rab6aP35279 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab6aP35279 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Rab6aP35279 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab6aP35279 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab6aP35279 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rab6aP35279 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.81■□□□□ 0.92
Rab6aP35279 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rab6aP35279 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rab6aP35279 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rab6aP35279 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab6aP35279 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab6aP35279 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rab6aP35279 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab6aP35279 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rab6aP35279 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rab6aP35279 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab6aP35279 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab6aP35279 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab6aP35279 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rab6aP35279 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rab6aP35279 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rab6aP35279 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab6aP35279 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Rab6aP35279 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab6aP35279 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.77■□□□□ 0.92
Rab6aP35279 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Rab6aP35279 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab6aP35279 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab6aP35279 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab6aP35279 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rab6aP35279 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab6aP35279 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab6aP35279 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab6aP35279 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab6aP35279 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab6aP35279 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab6aP35279 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab6aP35279 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.73■□□□□ 0.91
Rab6aP35279 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rab6aP35279 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rab6aP35279 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab6aP35279 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab6aP35279 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.72■□□□□ 0.91
Rab6aP35279 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab6aP35279 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab6aP35279 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rab6aP35279 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab6aP35279 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rab6aP35279 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab6aP35279 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rab6aP35279 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab6aP35279 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rab6aP35279 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab6aP35279 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rab6aP35279 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
Rab6aP35279 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab6aP35279 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab6aP35279 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rab6aP35279 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab6aP35279 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab6aP35279 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab6aP35279 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rab6aP35279 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.67■□□□□ 0.9
Rab6aP35279 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab6aP35279 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rab6aP35279 Gm26115-201ENSMUST00000175605 87 ntBASIC20.66■□□□□ 0.9
Rab6aP35279 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rab6aP35279 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rab6aP35279 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab6aP35279 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab6aP35279 Gm8109-201ENSMUST00000194076 746 ntBASIC20.64■□□□□ 0.89
Rab6aP35279 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rab6aP35279 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab6aP35279 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Rab6aP35279 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab6aP35279 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab6aP35279 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab6aP35279 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab6aP35279 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab6aP35279 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rab6aP35279 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rab6aP35279 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab6aP35279 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab6aP35279 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rab6aP35279 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab6aP35279 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rab6aP35279 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab6aP35279 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.58■□□□□ 0.88
Rab6aP35279 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab6aP35279 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rab6aP35279 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab6aP35279 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rab6aP35279 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab6aP35279 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms