Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P06323 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.47■□□□□ 0.71
P06323 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P06323 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P06323 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.46■□□□□ 0.71
P06323 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P06323 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.46■□□□□ 0.71
P06323 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
P06323 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P06323 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P06323 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P06323 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P06323 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P06323 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P06323 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P06323 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
P06323 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P06323 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P06323 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P06323 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.43■□□□□ 0.7
P06323 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P06323 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P06323 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.42■□□□□ 0.7
P06323 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
P06323 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P06323 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P06323 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P06323 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
P06323 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.4■□□□□ 0.7
P06323 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
P06323 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P06323 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P06323 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P06323 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
P06323 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P06323 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P06323 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P06323 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P06323 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
P06323 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P06323 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
P06323 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.36■□□□□ 0.69
P06323 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P06323 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P06323 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P06323 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
P06323 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P06323 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P06323 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P06323 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P06323 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.33■□□□□ 0.68
P06323 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P06323 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
P06323 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
P06323 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P06323 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P06323 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P06323 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.32■□□□□ 0.68
P06323 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P06323 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P06323 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
P06323 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06323 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06323 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06323 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06323 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P06323 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
P06323 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P06323 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P06323 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P06323 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P06323 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P06323 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
P06323 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P06323 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
P06323 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P06323 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P06323 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P06323 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
P06323 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.26■□□□□ 0.67
P06323 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
P06323 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P06323 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P06323 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P06323 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P06323 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P06323 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06323 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06323 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
P06323 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
P06323 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
P06323 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
P06323 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
P06323 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P06323 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P06323 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P06323 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P06323 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
P06323 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.18■□□□□ 0.66
P06323 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms