Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tuba1bP05213 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tuba1bP05213 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tuba1bP05213 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tuba1bP05213 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tuba1bP05213 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tuba1bP05213 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Tuba1bP05213 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tuba1bP05213 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Tuba1bP05213 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
Tuba1bP05213 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tuba1bP05213 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
Tuba1bP05213 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Tuba1bP05213 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.21■■□□□ 1.15
Tuba1bP05213 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tuba1bP05213 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Tuba1bP05213 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Tuba1bP05213 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Tuba1bP05213 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tuba1bP05213 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Tuba1bP05213 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tuba1bP05213 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Tuba1bP05213 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.19■■□□□ 1.14
Tuba1bP05213 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.19■■□□□ 1.14
Tuba1bP05213 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tuba1bP05213 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.18■■□□□ 1.14
Tuba1bP05213 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Tuba1bP05213 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tuba1bP05213 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Tuba1bP05213 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Tuba1bP05213 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Tuba1bP05213 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Tuba1bP05213 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Tuba1bP05213 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tuba1bP05213 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Tuba1bP05213 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Tuba1bP05213 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tuba1bP05213 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tuba1bP05213 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tuba1bP05213 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Tuba1bP05213 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tuba1bP05213 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Tuba1bP05213 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Tuba1bP05213 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Tuba1bP05213 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Tuba1bP05213 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.08■■□□□ 1.13
Tuba1bP05213 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.08■■□□□ 1.13
Tuba1bP05213 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
Tuba1bP05213 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Tuba1bP05213 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.06■■□□□ 1.12
Tuba1bP05213 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Tuba1bP05213 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tuba1bP05213 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Tuba1bP05213 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Tuba1bP05213 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Tuba1bP05213 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Tuba1bP05213 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tuba1bP05213 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tuba1bP05213 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Tuba1bP05213 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Tuba1bP05213 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.01■■□□□ 1.11
Tuba1bP05213 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22■■□□□ 1.11
Tuba1bP05213 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tuba1bP05213 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22■■□□□ 1.11
Tuba1bP05213 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tuba1bP05213 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tuba1bP05213 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tuba1bP05213 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tuba1bP05213 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tuba1bP05213 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tuba1bP05213 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Tuba1bP05213 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tuba1bP05213 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tuba1bP05213 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Tuba1bP05213 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Tuba1bP05213 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.96■■□□□ 1.11
Tuba1bP05213 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.96■■□□□ 1.11
Tuba1bP05213 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tuba1bP05213 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tuba1bP05213 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tuba1bP05213 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Tuba1bP05213 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tuba1bP05213 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tuba1bP05213 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tuba1bP05213 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Tuba1bP05213 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tuba1bP05213 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tuba1bP05213 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tuba1bP05213 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tuba1bP05213 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tuba1bP05213 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Tuba1bP05213 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tuba1bP05213 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tuba1bP05213 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tuba1bP05213 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tuba1bP05213 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tuba1bP05213 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Tuba1bP05213 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tuba1bP05213 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Tuba1bP05213 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms